Protein–RNA interactions for Protein: Q8N0Y7

PGAM4, Probable phosphoglycerate mutase 4, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM4Q8N0Y7 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 SART3-203ENST00000546611 1184 ntBASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 AC138894.3-201ENST00000603787 634 ntBASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PGAM4Q8N0Y7 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 PCDHA3-202ENST00000532566 4594 ntBASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 PMS2P4-201ENST00000412466 1052 ntBASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 RN7SL850P-201ENST00000579959 291 ntBASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 MIR4515-201ENST00000584082 81 ntBASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 MIR4321-201ENST00000592276 80 ntBASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 AL355877.3-201ENST00000622820 899 ntBASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 AC007686.3-201ENST00000619017 3487 ntBASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 AJ011931.1-201ENST00000618749 2492 ntBASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.31■□□□□ 0.04
PGAM4Q8N0Y7 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.3■□□□□ 0.04
PGAM4Q8N0Y7 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.3■□□□□ 0.04
PGAM4Q8N0Y7 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.3■□□□□ 0.04
PGAM4Q8N0Y7 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.3■□□□□ 0.04
PGAM4Q8N0Y7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PGAM4Q8N0Y7 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PGAM4Q8N0Y7 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PGAM4Q8N0Y7 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PGAM4Q8N0Y7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PGAM4Q8N0Y7 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PGAM4Q8N0Y7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PGAM4Q8N0Y7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms