Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.7■□□□□ 0.26
RFX6Q8HWS3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
RFX6Q8HWS3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 AC142381.1-201ENST00000426099 345 ntBASIC16.69■□□□□ 0.26
RFX6Q8HWS3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 SPCS2P4-201ENST00000436160 681 ntBASIC16.69■□□□□ 0.26
RFX6Q8HWS3 AC079140.1-201ENST00000508039 487 ntBASIC16.69■□□□□ 0.26
RFX6Q8HWS3 IGHV3-62-201ENST00000520057 340 ntBASIC16.69■□□□□ 0.26
RFX6Q8HWS3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 C20orf181-201ENST00000623918 480 ntBASIC16.69■□□□□ 0.26
RFX6Q8HWS3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFX6Q8HWS3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 AC092384.3-202ENST00000564646 2873 ntBASIC16.68■□□□□ 0.26
RFX6Q8HWS3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 AC004832.2-201ENST00000426397 482 ntBASIC16.68■□□□□ 0.26
RFX6Q8HWS3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 CICP13-201ENST00000422015 2789 ntBASIC16.68■□□□□ 0.26
RFX6Q8HWS3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.68■□□□□ 0.26
RFX6Q8HWS3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFX6Q8HWS3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms