Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF43Q68DV7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
RNF43Q68DV7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF43Q68DV7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF43Q68DV7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF43Q68DV7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RNF43Q68DV7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF43Q68DV7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF43Q68DV7 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF43Q68DV7 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF43Q68DV7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF43Q68DV7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RNF43Q68DV7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF43Q68DV7 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF43Q68DV7 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF43Q68DV7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF43Q68DV7 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF43Q68DV7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF43Q68DV7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RNF43Q68DV7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
RNF43Q68DV7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF43Q68DV7 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF43Q68DV7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF43Q68DV7 AL603832.2-201ENST00000566195 2125 ntBASIC16.84■□□□□ 0.29
RNF43Q68DV7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
RNF43Q68DV7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RNF43Q68DV7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF43Q68DV7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF43Q68DV7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF43Q68DV7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.84■□□□□ 0.29
RNF43Q68DV7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.84■□□□□ 0.29
RNF43Q68DV7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF43Q68DV7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF43Q68DV7 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF43Q68DV7 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF43Q68DV7 AL158211.3-201ENST00000607385 239 ntBASIC16.84■□□□□ 0.29
RNF43Q68DV7 MIR6080-201ENST00000617359 66 ntBASIC16.84■□□□□ 0.29
RNF43Q68DV7 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF43Q68DV7 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF43Q68DV7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF43Q68DV7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF43Q68DV7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.84■□□□□ 0.29
RNF43Q68DV7 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF43Q68DV7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RNF43Q68DV7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF43Q68DV7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF43Q68DV7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF43Q68DV7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF43Q68DV7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF43Q68DV7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RNF43Q68DV7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RNF43Q68DV7 LINC02228-204ENST00000642115 2962 ntBASIC16.83■□□□□ 0.29
RNF43Q68DV7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RNF43Q68DV7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RNF43Q68DV7 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
RNF43Q68DV7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RNF43Q68DV7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF43Q68DV7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF43Q68DV7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF43Q68DV7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
RNF43Q68DV7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF43Q68DV7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RNF43Q68DV7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.83■□□□□ 0.28
RNF43Q68DV7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF43Q68DV7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.83■□□□□ 0.28
RNF43Q68DV7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF43Q68DV7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF43Q68DV7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.83■□□□□ 0.28
RNF43Q68DV7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF43Q68DV7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF43Q68DV7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF43Q68DV7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.83■□□□□ 0.28
RNF43Q68DV7 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.83■□□□□ 0.28
RNF43Q68DV7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF43Q68DV7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.83■□□□□ 0.28
RNF43Q68DV7 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF43Q68DV7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.83■□□□□ 0.28
RNF43Q68DV7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF43Q68DV7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RNF43Q68DV7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RNF43Q68DV7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF43Q68DV7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF43Q68DV7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF43Q68DV7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.82■□□□□ 0.28
RNF43Q68DV7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF43Q68DV7 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
RNF43Q68DV7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF43Q68DV7 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RNF43Q68DV7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.82■□□□□ 0.28
RNF43Q68DV7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF43Q68DV7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RNF43Q68DV7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
RNF43Q68DV7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF43Q68DV7 AL589702.1-201ENST00000641229 1509 ntBASIC16.82■□□□□ 0.28
RNF43Q68DV7 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RNF43Q68DV7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RNF43Q68DV7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF43Q68DV7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF43Q68DV7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.82■□□□□ 0.28
RNF43Q68DV7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms