Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
IRX3P78415 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IRX3P78415 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX3P78415 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.66■□□□□ 0.58
IRX3P78415 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX3P78415 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
IRX3P78415 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
IRX3P78415 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
IRX3P78415 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
IRX3P78415 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.66■□□□□ 0.58
IRX3P78415 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.66■□□□□ 0.58
IRX3P78415 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.66■□□□□ 0.58
IRX3P78415 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.66■□□□□ 0.58
IRX3P78415 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.66■□□□□ 0.58
IRX3P78415 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
IRX3P78415 MIR4321-201ENST00000592276 80 ntBASIC18.66■□□□□ 0.58
IRX3P78415 TMEM261P1-201ENST00000604899 340 ntBASIC18.66■□□□□ 0.58
IRX3P78415 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IRX3P78415 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.66■□□□□ 0.58
IRX3P78415 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX3P78415 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.66■□□□□ 0.58
IRX3P78415 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IRX3P78415 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX3P78415 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
IRX3P78415 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.66■□□□□ 0.58
IRX3P78415 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX3P78415 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX3P78415 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
IRX3P78415 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX3P78415 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX3P78415 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX3P78415 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX3P78415 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX3P78415 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX3P78415 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX3P78415 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.66■□□□□ 0.58
IRX3P78415 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IRX3P78415 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX3P78415 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX3P78415 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.65■□□□□ 0.58
IRX3P78415 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX3P78415 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX3P78415 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.65■□□□□ 0.58
IRX3P78415 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
IRX3P78415 AC022494.1-201ENST00000466044 728 ntBASIC18.65■□□□□ 0.58
IRX3P78415 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.65■□□□□ 0.58
IRX3P78415 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
IRX3P78415 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.65■□□□□ 0.58
IRX3P78415 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
IRX3P78415 MIR8072-201ENST00000614241 80 ntBASIC18.65■□□□□ 0.58
IRX3P78415 AL033527.5-201ENST00000641382 801 ntBASIC18.65■□□□□ 0.58
IRX3P78415 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX3P78415 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX3P78415 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX3P78415 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IRX3P78415 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX3P78415 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.65■□□□□ 0.58
IRX3P78415 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.65■□□□□ 0.58
IRX3P78415 LINC01144-201ENST00000626198 1710 ntBASIC18.65■□□□□ 0.58
IRX3P78415 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IRX3P78415 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX3P78415 LINC02228-204ENST00000642115 2962 ntBASIC18.65■□□□□ 0.58
IRX3P78415 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IRX3P78415 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.65■□□□□ 0.58
IRX3P78415 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX3P78415 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX3P78415 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
IRX3P78415 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
IRX3P78415 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.58
IRX3P78415 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.64■□□□□ 0.58
IRX3P78415 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
IRX3P78415 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
IRX3P78415 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.64■□□□□ 0.58
IRX3P78415 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX3P78415 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC18.64■□□□□ 0.57
IRX3P78415 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IRX3P78415 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
IRX3P78415 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX3P78415 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX3P78415 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX3P78415 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX3P78415 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.64■□□□□ 0.57
IRX3P78415 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.64■□□□□ 0.57
IRX3P78415 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.64■□□□□ 0.57
IRX3P78415 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IRX3P78415 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.64■□□□□ 0.57
IRX3P78415 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.64■□□□□ 0.57
IRX3P78415 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.64■□□□□ 0.57
IRX3P78415 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.64■□□□□ 0.57
IRX3P78415 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.64■□□□□ 0.57
IRX3P78415 RARRES2P5-201ENST00000564013 466 ntBASIC18.64■□□□□ 0.57
IRX3P78415 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.64■□□□□ 0.57
IRX3P78415 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.64■□□□□ 0.57
IRX3P78415 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.64■□□□□ 0.57
IRX3P78415 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX3P78415 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX3P78415 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
IRX3P78415 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
IRX3P78415 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
IRX3P78415 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms