Protein–RNA interactions for Protein: P59665

DEFA1, Neutrophil defensin 1, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA1P59665 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
DEFA1P59665 KRT8P44-201ENST00000441609 1350 ntBASIC14.09□□□□□ -0.15
DEFA1P59665 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
DEFA1P59665 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
DEFA1P59665 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.09□□□□□ -0.15
DEFA1P59665 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.09□□□□□ -0.15
DEFA1P59665 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DEFA1P59665 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
DEFA1P59665 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DEFA1P59665 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
DEFA1P59665 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.09□□□□□ -0.15
DEFA1P59665 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.09□□□□□ -0.15
DEFA1P59665 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
DEFA1P59665 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.09□□□□□ -0.15
DEFA1P59665 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
DEFA1P59665 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
DEFA1P59665 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
DEFA1P59665 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
DEFA1P59665 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.09□□□□□ -0.15
DEFA1P59665 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.09□□□□□ -0.15
DEFA1P59665 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.09□□□□□ -0.15
DEFA1P59665 AC009947.2-201ENST00000444014 672 ntBASIC14.09□□□□□ -0.15
DEFA1P59665 AC026366.1-201ENST00000488803 879 ntBASIC14.09□□□□□ -0.15
DEFA1P59665 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.09□□□□□ -0.15
DEFA1P59665 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DEFA1P59665 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
DEFA1P59665 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC14.09□□□□□ -0.15
DEFA1P59665 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
DEFA1P59665 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.09□□□□□ -0.15
DEFA1P59665 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DEFA1P59665 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
DEFA1P59665 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.09□□□□□ -0.15
DEFA1P59665 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.09□□□□□ -0.15
DEFA1P59665 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
DEFA1P59665 AC027601.5-201ENST00000624065 2482 ntBASIC14.09□□□□□ -0.15
DEFA1P59665 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
DEFA1P59665 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DEFA1P59665 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DEFA1P59665 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
DEFA1P59665 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.09□□□□□ -0.15
DEFA1P59665 BX640514.1-201ENST00000583223 1918 ntBASIC14.09□□□□□ -0.15
DEFA1P59665 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
DEFA1P59665 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.09□□□□□ -0.15
DEFA1P59665 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DEFA1P59665 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
DEFA1P59665 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DEFA1P59665 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DEFA1P59665 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
DEFA1P59665 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
DEFA1P59665 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DEFA1P59665 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DEFA1P59665 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
DEFA1P59665 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
DEFA1P59665 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.09□□□□□ -0.15
DEFA1P59665 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
DEFA1P59665 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DEFA1P59665 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
DEFA1P59665 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
DEFA1P59665 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
DEFA1P59665 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
DEFA1P59665 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
DEFA1P59665 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.08□□□□□ -0.15
DEFA1P59665 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.08□□□□□ -0.15
DEFA1P59665 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
DEFA1P59665 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.08□□□□□ -0.15
DEFA1P59665 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
DEFA1P59665 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.08□□□□□ -0.15
DEFA1P59665 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
DEFA1P59665 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.08□□□□□ -0.16
DEFA1P59665 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DEFA1P59665 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.08□□□□□ -0.16
DEFA1P59665 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.08□□□□□ -0.16
DEFA1P59665 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DEFA1P59665 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DEFA1P59665 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.08□□□□□ -0.16
DEFA1P59665 AL928921.2-201ENST00000641325 2442 ntBASIC14.08□□□□□ -0.16
DEFA1P59665 KLF4P1-201ENST00000412782 1185 ntBASIC14.08□□□□□ -0.16
DEFA1P59665 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.08□□□□□ -0.16
DEFA1P59665 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DEFA1P59665 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.08□□□□□ -0.16
DEFA1P59665 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.08□□□□□ -0.16
DEFA1P59665 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.08□□□□□ -0.16
DEFA1P59665 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.08□□□□□ -0.16
DEFA1P59665 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC14.08□□□□□ -0.16
DEFA1P59665 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.08□□□□□ -0.16
DEFA1P59665 AC116562.4-202ENST00000641738 218 ntBASIC14.08□□□□□ -0.16
DEFA1P59665 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DEFA1P59665 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DEFA1P59665 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DEFA1P59665 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
DEFA1P59665 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
DEFA1P59665 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DEFA1P59665 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DEFA1P59665 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.08□□□□□ -0.16
DEFA1P59665 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DEFA1P59665 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DEFA1P59665 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DEFA1P59665 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
DEFA1P59665 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DEFA1P59665 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms