Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14□□□□□ -0.17
CLDN12P56749 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14□□□□□ -0.17
CLDN12P56749 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14□□□□□ -0.17
CLDN12P56749 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CLDN12P56749 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN12P56749 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN12P56749 CICP23-201ENST00000605013 2741 ntBASIC14□□□□□ -0.17
CLDN12P56749 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
CLDN12P56749 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN12P56749 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN12P56749 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CLDN12P56749 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
CLDN12P56749 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN12P56749 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN12P56749 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN12P56749 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CLDN12P56749 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDN12P56749 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN12P56749 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN12P56749 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN12P56749 AC009090.5-201ENST00000624886 2285 ntBASIC13.99□□□□□ -0.17
CLDN12P56749 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN12P56749 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN12P56749 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN12P56749 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN12P56749 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.99□□□□□ -0.17
CLDN12P56749 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN12P56749 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.99□□□□□ -0.17
CLDN12P56749 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CLDN12P56749 C18orf15-201ENST00000623680 2534 ntBASIC13.99□□□□□ -0.17
CLDN12P56749 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN12P56749 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.99□□□□□ -0.17
CLDN12P56749 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN12P56749 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.99□□□□□ -0.17
CLDN12P56749 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.99□□□□□ -0.17
CLDN12P56749 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN12P56749 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.99□□□□□ -0.17
CLDN12P56749 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN12P56749 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN12P56749 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN12P56749 ATP5G2P1-201ENST00000433580 426 ntBASIC13.99□□□□□ -0.17
CLDN12P56749 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
CLDN12P56749 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.99□□□□□ -0.17
CLDN12P56749 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.99□□□□□ -0.17
CLDN12P56749 AC025062.2-201ENST00000605477 670 ntBASIC13.99□□□□□ -0.17
CLDN12P56749 AC008608.2-201ENST00000606089 416 ntBASIC13.99□□□□□ -0.17
CLDN12P56749 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
CLDN12P56749 AP000550.4-202ENST00000639755 178 ntBASIC13.99□□□□□ -0.17
CLDN12P56749 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.99□□□□□ -0.17
CLDN12P56749 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.99□□□□□ -0.17
CLDN12P56749 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.99□□□□□ -0.17
CLDN12P56749 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN12P56749 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN12P56749 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.99□□□□□ -0.17
CLDN12P56749 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.99□□□□□ -0.17
CLDN12P56749 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN12P56749 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN12P56749 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.99□□□□□ -0.17
CLDN12P56749 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CLDN12P56749 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.99□□□□□ -0.17
CLDN12P56749 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CLDN12P56749 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN12P56749 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN12P56749 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN12P56749 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN12P56749 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN12P56749 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
CLDN12P56749 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CLDN12P56749 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.99□□□□□ -0.17
CLDN12P56749 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.99□□□□□ -0.17
CLDN12P56749 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN12P56749 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN12P56749 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN12P56749 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN12P56749 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN12P56749 AC112693.3-201ENST00000624819 1983 ntBASIC13.98□□□□□ -0.17
CLDN12P56749 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN12P56749 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.98□□□□□ -0.17
CLDN12P56749 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN12P56749 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.98□□□□□ -0.17
CLDN12P56749 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN12P56749 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CLDN12P56749 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN12P56749 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN12P56749 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CLDN12P56749 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN12P56749 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN12P56749 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN12P56749 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN12P56749 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CLDN12P56749 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN12P56749 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.98□□□□□ -0.17
CLDN12P56749 DUSP5P1-201ENST00000441325 1139 ntBASIC13.98□□□□□ -0.17
CLDN12P56749 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN12P56749 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.98□□□□□ -0.17
CLDN12P56749 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN12P56749 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN12P56749 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN12P56749 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN12P56749 AC006557.2-201ENST00000592985 1240 ntBASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms