Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH8P55286 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH8P55286 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH8P55286 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH8P55286 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH8P55286 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH8P55286 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH8P55286 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH8P55286 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.05■□□□□ 0.32
CDH8P55286 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.05■□□□□ 0.32
CDH8P55286 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH8P55286 BCRP1-201ENST00000444246 691 ntBASIC17.05■□□□□ 0.32
CDH8P55286 AC009477.1-201ENST00000452936 217 ntBASIC17.05■□□□□ 0.32
CDH8P55286 RN7SL618P-201ENST00000477850 296 ntBASIC17.05■□□□□ 0.32
CDH8P55286 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.05■□□□□ 0.32
CDH8P55286 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.05■□□□□ 0.32
CDH8P55286 RNA5SP421-201ENST00000516864 134 ntBASIC17.05■□□□□ 0.32
CDH8P55286 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH8P55286 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CDH8P55286 SPCS2P1-201ENST00000561636 679 ntBASIC17.05■□□□□ 0.32
CDH8P55286 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CDH8P55286 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH8P55286 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH8P55286 MIR6069-201ENST00000620069 79 ntBASIC17.05■□□□□ 0.32
CDH8P55286 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.05■□□□□ 0.32
CDH8P55286 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH8P55286 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH8P55286 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH8P55286 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH8P55286 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH8P55286 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CDH8P55286 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CDH8P55286 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH8P55286 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH8P55286 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CDH8P55286 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
CDH8P55286 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH8P55286 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH8P55286 AC132872.4-202ENST00000622924 2756 ntBASIC17.05■□□□□ 0.32
CDH8P55286 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH8P55286 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH8P55286 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH8P55286 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH8P55286 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH8P55286 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH8P55286 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH8P55286 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH8P55286 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH8P55286 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH8P55286 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH8P55286 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH8P55286 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
CDH8P55286 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.04■□□□□ 0.32
CDH8P55286 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CDH8P55286 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH8P55286 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CDH8P55286 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH8P55286 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CDH8P55286 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.04■□□□□ 0.32
CDH8P55286 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.04■□□□□ 0.32
CDH8P55286 SERBP1P3-201ENST00000459980 809 ntBASIC17.04■□□□□ 0.32
CDH8P55286 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH8P55286 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH8P55286 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH8P55286 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CDH8P55286 AL450472.2-201ENST00000603663 1156 ntBASIC17.04■□□□□ 0.32
CDH8P55286 AC008738.7-201ENST00000609744 511 ntBASIC17.04■□□□□ 0.32
CDH8P55286 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
CDH8P55286 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH8P55286 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH8P55286 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH8P55286 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH8P55286 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH8P55286 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.04■□□□□ 0.32
CDH8P55286 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH8P55286 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH8P55286 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH8P55286 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH8P55286 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDH8P55286 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
CDH8P55286 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH8P55286 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH8P55286 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH8P55286 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CDH8P55286 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.04■□□□□ 0.32
CDH8P55286 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH8P55286 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH8P55286 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH8P55286 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH8P55286 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH8P55286 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH8P55286 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.03■□□□□ 0.32
CDH8P55286 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
CDH8P55286 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH8P55286 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH8P55286 AC022144.1-201ENST00000602255 1580 ntBASIC17.03■□□□□ 0.32
CDH8P55286 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CDH8P55286 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH8P55286 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH8P55286 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms