Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 AP3S2-216ENST00000617003 1561 ntBASIC16.05■□□□□ 0.16
ARCN1P48444 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARCN1P48444 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ARCN1P48444 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.05■□□□□ 0.16
ARCN1P48444 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
ARCN1P48444 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.05■□□□□ 0.16
ARCN1P48444 PPT1-215ENST00000641471 2368 ntBASIC16.05■□□□□ 0.16
ARCN1P48444 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARCN1P48444 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARCN1P48444 SSR4P1-203ENST00000599569 2260 ntBASIC16.05■□□□□ 0.16
ARCN1P48444 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARCN1P48444 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARCN1P48444 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ARCN1P48444 AC004987.2-201ENST00000395959 1148 ntBASIC16.05■□□□□ 0.16
ARCN1P48444 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.05■□□□□ 0.16
ARCN1P48444 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.05■□□□□ 0.16
ARCN1P48444 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.05■□□□□ 0.16
ARCN1P48444 AC023141.5-201ENST00000458585 616 ntBASIC16.05■□□□□ 0.16
ARCN1P48444 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ARCN1P48444 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARCN1P48444 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARCN1P48444 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARCN1P48444 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARCN1P48444 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARCN1P48444 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARCN1P48444 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.05■□□□□ 0.16
ARCN1P48444 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ARCN1P48444 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ARCN1P48444 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARCN1P48444 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARCN1P48444 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARCN1P48444 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARCN1P48444 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.05■□□□□ 0.16
ARCN1P48444 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.04■□□□□ 0.16
ARCN1P48444 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARCN1P48444 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARCN1P48444 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ARCN1P48444 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ARCN1P48444 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ARCN1P48444 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARCN1P48444 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
ARCN1P48444 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.04■□□□□ 0.16
ARCN1P48444 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.04■□□□□ 0.16
ARCN1P48444 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ARCN1P48444 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ARCN1P48444 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.04■□□□□ 0.16
ARCN1P48444 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.04■□□□□ 0.16
ARCN1P48444 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARCN1P48444 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.04■□□□□ 0.16
ARCN1P48444 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARCN1P48444 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARCN1P48444 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.04■□□□□ 0.16
ARCN1P48444 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARCN1P48444 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARCN1P48444 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.04■□□□□ 0.16
ARCN1P48444 KRT18P32-201ENST00000424695 1287 ntBASIC16.04■□□□□ 0.16
ARCN1P48444 FAM58DP-201ENST00000428076 619 ntBASIC16.04■□□□□ 0.16
ARCN1P48444 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.04■□□□□ 0.16
ARCN1P48444 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.04■□□□□ 0.16
ARCN1P48444 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.04■□□□□ 0.16
ARCN1P48444 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.04■□□□□ 0.16
ARCN1P48444 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.04■□□□□ 0.16
ARCN1P48444 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.04■□□□□ 0.16
ARCN1P48444 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.04■□□□□ 0.16
ARCN1P48444 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.04■□□□□ 0.16
ARCN1P48444 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.04■□□□□ 0.16
ARCN1P48444 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARCN1P48444 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARCN1P48444 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARCN1P48444 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.04■□□□□ 0.16
ARCN1P48444 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARCN1P48444 REXO1L1P-202ENST00000608646 1974 ntBASIC16.04■□□□□ 0.16
ARCN1P48444 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.04■□□□□ 0.16
ARCN1P48444 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARCN1P48444 AC136621.1-201ENST00000624017 2304 ntBASIC16.03■□□□□ 0.16
ARCN1P48444 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.03■□□□□ 0.16
ARCN1P48444 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARCN1P48444 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARCN1P48444 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARCN1P48444 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ARCN1P48444 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ARCN1P48444 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ARCN1P48444 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
ARCN1P48444 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.03■□□□□ 0.16
ARCN1P48444 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.03■□□□□ 0.16
ARCN1P48444 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ARCN1P48444 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARCN1P48444 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARCN1P48444 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARCN1P48444 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.03■□□□□ 0.16
ARCN1P48444 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.03■□□□□ 0.16
ARCN1P48444 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.03■□□□□ 0.16
ARCN1P48444 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ARCN1P48444 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.03■□□□□ 0.16
ARCN1P48444 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.03■□□□□ 0.16
ARCN1P48444 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.03■□□□□ 0.16
ARCN1P48444 AC109322.1-201ENST00000524499 1264 ntBASIC16.03■□□□□ 0.16
ARCN1P48444 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARCN1P48444 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.03■□□□□ 0.16
ARCN1P48444 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms