Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATRXP46100 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ATRXP46100 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ATRXP46100 PP12613-201ENST00000424958 2230 ntBASIC14.46□□□□□ -0.09
ATRXP46100 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ATRXP46100 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.46□□□□□ -0.09
ATRXP46100 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
ATRXP46100 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.46□□□□□ -0.09
ATRXP46100 HNRNPA1P42-201ENST00000458678 957 ntBASIC14.46□□□□□ -0.09
ATRXP46100 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC14.46□□□□□ -0.09
ATRXP46100 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
ATRXP46100 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATRXP46100 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ATRXP46100 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.46□□□□□ -0.1
ATRXP46100 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
ATRXP46100 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ATRXP46100 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.46□□□□□ -0.1
ATRXP46100 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
ATRXP46100 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
ATRXP46100 C1QBPP1-201ENST00000400117 770 ntBASIC14.46□□□□□ -0.1
ATRXP46100 IGLV3-15-201ENST00000518356 244 ntBASIC14.46□□□□□ -0.1
ATRXP46100 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.46□□□□□ -0.1
ATRXP46100 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
ATRXP46100 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATRXP46100 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATRXP46100 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.45□□□□□ -0.1
ATRXP46100 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATRXP46100 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATRXP46100 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATRXP46100 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATRXP46100 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATRXP46100 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATRXP46100 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATRXP46100 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATRXP46100 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATRXP46100 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATRXP46100 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATRXP46100 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATRXP46100 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATRXP46100 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATRXP46100 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATRXP46100 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATRXP46100 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATRXP46100 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.45□□□□□ -0.1
ATRXP46100 PIN4P1-201ENST00000451079 396 ntBASIC14.45□□□□□ -0.1
ATRXP46100 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.45□□□□□ -0.1
ATRXP46100 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATRXP46100 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.45□□□□□ -0.1
ATRXP46100 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.45□□□□□ -0.1
ATRXP46100 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.45□□□□□ -0.1
ATRXP46100 GPAA1P2-202ENST00000606848 1787 ntBASIC14.45□□□□□ -0.1
ATRXP46100 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.45□□□□□ -0.1
ATRXP46100 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.45□□□□□ -0.1
ATRXP46100 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATRXP46100 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATRXP46100 U82695.1-201ENST00000635752 1889 ntBASIC14.45□□□□□ -0.1
ATRXP46100 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATRXP46100 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.45□□□□□ -0.1
ATRXP46100 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.45□□□□□ -0.1
ATRXP46100 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATRXP46100 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
ATRXP46100 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.44□□□□□ -0.1
ATRXP46100 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATRXP46100 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.44□□□□□ -0.1
ATRXP46100 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.44□□□□□ -0.1
ATRXP46100 AC025279.2-201ENST00000569730 653 ntBASIC14.44□□□□□ -0.1
ATRXP46100 RN7SL774P-201ENST00000577467 290 ntBASIC14.44□□□□□ -0.1
ATRXP46100 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC14.44□□□□□ -0.1
ATRXP46100 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC14.44□□□□□ -0.1
ATRXP46100 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATRXP46100 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATRXP46100 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATRXP46100 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.44□□□□□ -0.1
ATRXP46100 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATRXP46100 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
ATRXP46100 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATRXP46100 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATRXP46100 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ATRXP46100 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATRXP46100 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATRXP46100 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATRXP46100 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATRXP46100 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATRXP46100 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ATRXP46100 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATRXP46100 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ATRXP46100 HKR1-225ENST00000592168 566 ntTSL 4 BASIC14.44□□□□□ -0.1
ATRXP46100 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATRXP46100 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATRXP46100 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATRXP46100 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.44□□□□□ -0.1
ATRXP46100 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ATRXP46100 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATRXP46100 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATRXP46100 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATRXP46100 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATRXP46100 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.44□□□□□ -0.1
ATRXP46100 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
ATRXP46100 AC008132.1-202ENST00000342005 1389 ntBASIC14.44□□□□□ -0.1
ATRXP46100 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms