Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AL158211.3-201ENST00000607385 239 ntBASIC17.46■□□□□ 0.39
RFX1P22670 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFX1P22670 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFX1P22670 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.46■□□□□ 0.39
RFX1P22670 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFX1P22670 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RFX1P22670 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFX1P22670 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFX1P22670 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
RFX1P22670 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
RFX1P22670 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFX1P22670 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
RFX1P22670 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
RFX1P22670 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFX1P22670 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX1P22670 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX1P22670 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
RFX1P22670 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX1P22670 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.45■□□□□ 0.38
RFX1P22670 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.45■□□□□ 0.38
RFX1P22670 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.45■□□□□ 0.38
RFX1P22670 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.45■□□□□ 0.38
RFX1P22670 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
RFX1P22670 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX1P22670 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.45■□□□□ 0.38
RFX1P22670 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RFX1P22670 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RFX1P22670 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFX1P22670 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
RFX1P22670 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RFX1P22670 MIR661-201ENST00000384842 89 ntBASIC17.45■□□□□ 0.38
RFX1P22670 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RFX1P22670 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
RFX1P22670 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
RFX1P22670 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
RFX1P22670 CRB3P1-201ENST00000449338 276 ntBASIC17.45■□□□□ 0.38
RFX1P22670 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.45■□□□□ 0.38
RFX1P22670 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.45■□□□□ 0.38
RFX1P22670 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.45■□□□□ 0.38
RFX1P22670 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC17.45■□□□□ 0.38
RFX1P22670 AC008267.7-201ENST00000624570 1194 ntBASIC17.45■□□□□ 0.38
RFX1P22670 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
RFX1P22670 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.45■□□□□ 0.38
RFX1P22670 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX1P22670 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX1P22670 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.45■□□□□ 0.38
RFX1P22670 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX1P22670 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.45■□□□□ 0.38
RFX1P22670 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
RFX1P22670 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFX1P22670 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RFX1P22670 AC008741.2-201ENST00000612792 3115 ntBASIC17.45■□□□□ 0.38
RFX1P22670 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX1P22670 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX1P22670 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.45■□□□□ 0.38
RFX1P22670 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.45■□□□□ 0.38
RFX1P22670 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX1P22670 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX1P22670 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX1P22670 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
RFX1P22670 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
RFX1P22670 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX1P22670 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX1P22670 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
RFX1P22670 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX1P22670 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX1P22670 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX1P22670 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.44■□□□□ 0.38
RFX1P22670 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.44■□□□□ 0.38
RFX1P22670 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.44■□□□□ 0.38
RFX1P22670 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.44■□□□□ 0.38
RFX1P22670 AC026150.2-201ENST00000564693 1156 ntBASIC17.44■□□□□ 0.38
RFX1P22670 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.44■□□□□ 0.38
RFX1P22670 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RFX1P22670 AC004233.3-201ENST00000607794 1269 ntBASIC17.44■□□□□ 0.38
RFX1P22670 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX1P22670 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX1P22670 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RFX1P22670 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFX1P22670 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX1P22670 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX1P22670 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX1P22670 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX1P22670 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.44■□□□□ 0.38
RFX1P22670 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX1P22670 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX1P22670 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX1P22670 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX1P22670 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RFX1P22670 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RFX1P22670 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.43■□□□□ 0.38
RFX1P22670 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX1P22670 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX1P22670 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RFX1P22670 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX1P22670 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX1P22670 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX1P22670 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RFX1P22670 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX1P22670 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms