Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
VCLP18206 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VCLP18206 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VCLP18206 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VCLP18206 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
VCLP18206 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VCLP18206 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VCLP18206 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VCLP18206 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.18■□□□□ 0.18
VCLP18206 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VCLP18206 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.18■□□□□ 0.18
VCLP18206 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.18■□□□□ 0.18
VCLP18206 METTL21AP1-201ENST00000438852 635 ntBASIC16.18■□□□□ 0.18
VCLP18206 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.18■□□□□ 0.18
VCLP18206 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VCLP18206 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.18■□□□□ 0.18
VCLP18206 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.18■□□□□ 0.18
VCLP18206 AC025678.2-201ENST00000562061 970 ntBASIC16.18■□□□□ 0.18
VCLP18206 LINC01225-203ENST00000563550 1244 ntBASIC16.18■□□□□ 0.18
VCLP18206 AC004449.1-201ENST00000564240 433 ntBASIC16.18■□□□□ 0.18
VCLP18206 AP000842.3-202ENST00000569238 1080 ntBASIC16.18■□□□□ 0.18
VCLP18206 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.18■□□□□ 0.18
VCLP18206 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.18■□□□□ 0.18
VCLP18206 TNRC18P2-201ENST00000417666 2714 ntBASIC16.18■□□□□ 0.18
VCLP18206 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.18■□□□□ 0.18
VCLP18206 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
VCLP18206 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VCLP18206 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VCLP18206 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
VCLP18206 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
VCLP18206 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.18■□□□□ 0.18
VCLP18206 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
VCLP18206 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
VCLP18206 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VCLP18206 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VCLP18206 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
VCLP18206 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.17■□□□□ 0.18
VCLP18206 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
VCLP18206 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VCLP18206 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
VCLP18206 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VCLP18206 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VCLP18206 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VCLP18206 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.17■□□□□ 0.18
VCLP18206 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.17■□□□□ 0.18
VCLP18206 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
VCLP18206 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VCLP18206 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VCLP18206 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VCLP18206 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
VCLP18206 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VCLP18206 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
VCLP18206 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.17■□□□□ 0.18
VCLP18206 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.17■□□□□ 0.18
VCLP18206 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.17■□□□□ 0.18
VCLP18206 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VCLP18206 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.17■□□□□ 0.18
VCLP18206 AC073389.1-201ENST00000595595 795 ntBASIC16.17■□□□□ 0.18
VCLP18206 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VCLP18206 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VCLP18206 AC084121.4-201ENST00000641598 221 ntBASIC16.17■□□□□ 0.18
VCLP18206 AF228730.8-201ENST00000642140 221 ntBASIC16.17■□□□□ 0.18
VCLP18206 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VCLP18206 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VCLP18206 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.17■□□□□ 0.18
VCLP18206 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
VCLP18206 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
VCLP18206 AC073439.1-201ENST00000624121 1774 ntBASIC16.17■□□□□ 0.18
VCLP18206 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VCLP18206 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.17■□□□□ 0.18
VCLP18206 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VCLP18206 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
VCLP18206 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VCLP18206 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.17■□□□□ 0.18
VCLP18206 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VCLP18206 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.17■□□□□ 0.18
VCLP18206 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
VCLP18206 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
VCLP18206 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VCLP18206 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
VCLP18206 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VCLP18206 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VCLP18206 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.17■□□□□ 0.18
VCLP18206 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VCLP18206 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VCLP18206 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VCLP18206 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VCLP18206 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCLP18206 AC022532.1-201ENST00000624563 1728 ntBASIC16.16■□□□□ 0.18
VCLP18206 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.16■□□□□ 0.18
VCLP18206 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCLP18206 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
VCLP18206 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VCLP18206 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VCLP18206 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCLP18206 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCLP18206 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
VCLP18206 AC006449.6-201ENST00000612330 2296 ntBASIC16.16■□□□□ 0.18
VCLP18206 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VCLP18206 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms