Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.92□□□□□ -0.02
PRKCAP17252 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.92□□□□□ -0.02
PRKCAP17252 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
PRKCAP17252 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
PRKCAP17252 AC093724.1-201ENST00000448659 1027 ntBASIC14.92□□□□□ -0.02
PRKCAP17252 CEND1P1-201ENST00000451006 455 ntBASIC14.92□□□□□ -0.02
PRKCAP17252 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PRKCAP17252 AC112482.1-201ENST00000492080 688 ntBASIC14.92□□□□□ -0.02
PRKCAP17252 YBX1P5-201ENST00000509441 847 ntBASIC14.92□□□□□ -0.02
PRKCAP17252 PRYP6-201ENST00000514804 343 ntBASIC14.92□□□□□ -0.02
PRKCAP17252 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
PRKCAP17252 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
PRKCAP17252 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
PRKCAP17252 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.92□□□□□ -0.02
PRKCAP17252 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.92□□□□□ -0.02
PRKCAP17252 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.92□□□□□ -0.02
PRKCAP17252 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PRKCAP17252 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.92□□□□□ -0.02
PRKCAP17252 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.92□□□□□ -0.02
PRKCAP17252 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.92□□□□□ -0.02
PRKCAP17252 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.92□□□□□ -0.02
PRKCAP17252 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.92□□□□□ -0.02
PRKCAP17252 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.92□□□□□ -0.02
PRKCAP17252 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
PRKCAP17252 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PRKCAP17252 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
PRKCAP17252 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.92□□□□□ -0.02
PRKCAP17252 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PRKCAP17252 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
PRKCAP17252 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PRKCAP17252 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PRKCAP17252 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCAP17252 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.91□□□□□ -0.02
PRKCAP17252 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PRKCAP17252 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCAP17252 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCAP17252 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.91□□□□□ -0.02
PRKCAP17252 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCAP17252 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCAP17252 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PRKCAP17252 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCAP17252 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.91□□□□□ -0.02
PRKCAP17252 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.91□□□□□ -0.02
PRKCAP17252 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCAP17252 AC068587.6-202ENST00000641839 5619 ntBASIC14.91□□□□□ -0.02
PRKCAP17252 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCAP17252 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCAP17252 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCAP17252 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.91□□□□□ -0.02
PRKCAP17252 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.91□□□□□ -0.02
PRKCAP17252 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.91□□□□□ -0.02
PRKCAP17252 SPDYE11-202ENST00000450699 704 ntBASIC14.91□□□□□ -0.02
PRKCAP17252 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCAP17252 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.91□□□□□ -0.02
PRKCAP17252 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PRKCAP17252 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.91□□□□□ -0.02
PRKCAP17252 SPDYE9P-201ENST00000570642 692 ntBASIC14.91□□□□□ -0.02
PRKCAP17252 MIR4469-201ENST00000583919 79 ntBASIC14.91□□□□□ -0.02
PRKCAP17252 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.91□□□□□ -0.02
PRKCAP17252 SPDYE10P-202ENST00000612005 668 ntBASIC14.91□□□□□ -0.02
PRKCAP17252 SPDYE8P-202ENST00000612377 668 ntBASIC14.91□□□□□ -0.02
PRKCAP17252 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.91□□□□□ -0.02
PRKCAP17252 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.91□□□□□ -0.02
PRKCAP17252 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCAP17252 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCAP17252 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.91□□□□□ -0.02
PRKCAP17252 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCAP17252 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.91□□□□□ -0.02
PRKCAP17252 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCAP17252 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.91□□□□□ -0.02
PRKCAP17252 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.91□□□□□ -0.02
PRKCAP17252 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCAP17252 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.91□□□□□ -0.02
PRKCAP17252 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCAP17252 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCAP17252 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
PRKCAP17252 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCAP17252 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCAP17252 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCAP17252 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.9□□□□□ -0.02
PRKCAP17252 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCAP17252 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCAP17252 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCAP17252 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCAP17252 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms