Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1DP16402 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST1H1DP16402 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1DP16402 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1DP16402 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1DP16402 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1DP16402 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H1DP16402 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1DP16402 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H1DP16402 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1DP16402 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HIST1H1DP16402 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1DP16402 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1DP16402 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1DP16402 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1DP16402 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1DP16402 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1DP16402 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1DP16402 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1DP16402 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1DP16402 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
HIST1H1DP16402 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1DP16402 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.63□□□□□ -0.23
HIST1H1DP16402 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
HIST1H1DP16402 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H1DP16402 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1DP16402 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
HIST1H1DP16402 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1DP16402 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1DP16402 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.63□□□□□ -0.23
HIST1H1DP16402 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H1DP16402 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H1DP16402 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H1DP16402 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1DP16402 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
HIST1H1DP16402 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H1DP16402 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1DP16402 MIR600HG-201ENST00000449175 5984 ntBASIC13.63□□□□□ -0.23
HIST1H1DP16402 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1DP16402 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1DP16402 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H1DP16402 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1DP16402 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1DP16402 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
HIST1H1DP16402 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H1DP16402 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H1DP16402 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1DP16402 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1DP16402 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1DP16402 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1DP16402 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1DP16402 AL009178.2-201ENST00000597278 2719 ntBASIC13.63□□□□□ -0.23
HIST1H1DP16402 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1DP16402 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.62□□□□□ -0.23
HIST1H1DP16402 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1DP16402 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1DP16402 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1DP16402 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1DP16402 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.62□□□□□ -0.23
HIST1H1DP16402 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1DP16402 LINC01101-201ENST00000622953 1884 ntBASIC13.62□□□□□ -0.23
HIST1H1DP16402 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HIST1H1DP16402 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1DP16402 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.62□□□□□ -0.23
HIST1H1DP16402 UPK3BP1-201ENST00000428678 509 ntBASIC13.62□□□□□ -0.23
HIST1H1DP16402 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.62□□□□□ -0.23
HIST1H1DP16402 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
HIST1H1DP16402 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.62□□□□□ -0.23
HIST1H1DP16402 AC002347.1-201ENST00000569543 541 ntBASIC13.62□□□□□ -0.23
HIST1H1DP16402 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
HIST1H1DP16402 MIR4751-201ENST00000578027 74 ntBASIC13.62□□□□□ -0.23
HIST1H1DP16402 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.62□□□□□ -0.23
HIST1H1DP16402 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HIST1H1DP16402 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
HIST1H1DP16402 AL078644.1-201ENST00000609881 752 ntBASIC13.62□□□□□ -0.23
HIST1H1DP16402 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HIST1H1DP16402 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1DP16402 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.62□□□□□ -0.23
HIST1H1DP16402 AC073439.1-201ENST00000624121 1774 ntBASIC13.62□□□□□ -0.23
HIST1H1DP16402 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1DP16402 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1DP16402 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.62□□□□□ -0.23
HIST1H1DP16402 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1DP16402 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1DP16402 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1DP16402 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.62□□□□□ -0.23
HIST1H1DP16402 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HIST1H1DP16402 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1DP16402 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
HIST1H1DP16402 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.62□□□□□ -0.23
HIST1H1DP16402 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1DP16402 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1DP16402 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1DP16402 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1DP16402 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.61□□□□□ -0.23
HIST1H1DP16402 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.61□□□□□ -0.23
HIST1H1DP16402 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.61□□□□□ -0.23
HIST1H1DP16402 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1DP16402 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HIST1H1DP16402 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms