Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 AL596087.1-201ENST00000400979 1969 ntBASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 MTND6P24-201ENST00000440466 518 ntBASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 SPDYE12P-201ENST00000618416 771 ntBASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 GPAA1P2-202ENST00000606848 1787 ntBASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 AC236430.1-201ENST00000402231 743 ntBASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 COX20P2-201ENST00000452636 358 ntBASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 TERF1P3-201ENST00000505638 1227 ntBASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 AC100757.3-201ENST00000622361 1406 ntBASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TMIGD3P0DMS9 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TMIGD3P0DMS9 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TMIGD3P0DMS9 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.53□□□□□ -0.08
TMIGD3P0DMS9 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMIGD3P0DMS9 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMIGD3P0DMS9 AL603832.2-201ENST00000566195 2125 ntBASIC14.53□□□□□ -0.08
TMIGD3P0DMS9 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMIGD3P0DMS9 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMIGD3P0DMS9 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMIGD3P0DMS9 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TMIGD3P0DMS9 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.53□□□□□ -0.08
TMIGD3P0DMS9 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TMIGD3P0DMS9 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.53□□□□□ -0.08
TMIGD3P0DMS9 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TMIGD3P0DMS9 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.53□□□□□ -0.08
TMIGD3P0DMS9 AC002472.2-201ENST00000442739 958 ntBASIC14.53□□□□□ -0.08
TMIGD3P0DMS9 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.53□□□□□ -0.08
TMIGD3P0DMS9 UGT1A2P-201ENST00000454886 866 ntBASIC14.53□□□□□ -0.08
TMIGD3P0DMS9 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.53□□□□□ -0.08
TMIGD3P0DMS9 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TMIGD3P0DMS9 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMIGD3P0DMS9 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.53□□□□□ -0.08
TMIGD3P0DMS9 HLA-J-202ENST00000469281 1241 ntBASIC14.53□□□□□ -0.08
TMIGD3P0DMS9 HLA-V-204ENST00000476601 1289 ntBASIC14.53□□□□□ -0.08
TMIGD3P0DMS9 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.53□□□□□ -0.08
TMIGD3P0DMS9 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.53□□□□□ -0.08
TMIGD3P0DMS9 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMIGD3P0DMS9 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms