Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 RNA5SP416-201ENST00000516838 111 ntBASIC17.4■□□□□ 0.38
CCDC172P0C7W6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 PRAL-201ENST00000624952 3286 ntBASIC17.39■□□□□ 0.38
CCDC172P0C7W6 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC172P0C7W6 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
CCDC172P0C7W6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
CCDC172P0C7W6 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC172P0C7W6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC172P0C7W6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC172P0C7W6 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC172P0C7W6 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC172P0C7W6 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCDC172P0C7W6 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC172P0C7W6 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC172P0C7W6 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC172P0C7W6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC172P0C7W6 AC007967.2-201ENST00000432613 625 ntBASIC17.39■□□□□ 0.37
CCDC172P0C7W6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC172P0C7W6 KRT18P2-201ENST00000447938 1258 ntBASIC17.39■□□□□ 0.37
CCDC172P0C7W6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC172P0C7W6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.39■□□□□ 0.37
CCDC172P0C7W6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC172P0C7W6 AC024267.1-201ENST00000582320 895 ntBASIC17.39■□□□□ 0.37
CCDC172P0C7W6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC172P0C7W6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC172P0C7W6 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCDC172P0C7W6 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC172P0C7W6 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC172P0C7W6 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCDC172P0C7W6 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC172P0C7W6 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC172P0C7W6 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC172P0C7W6 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC172P0C7W6 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC172P0C7W6 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC172P0C7W6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 AC098859.1-201ENST00000502915 1238 ntBASIC17.38■□□□□ 0.37
CCDC172P0C7W6 AP002472.1-201ENST00000577490 586 ntBASIC17.38■□□□□ 0.37
CCDC172P0C7W6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC172P0C7W6 IL9RP2-201ENST00000423948 1312 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms