Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLTAP09496 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CLTAP09496 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.56■□□□□ 0.4
CLTAP09496 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLTAP09496 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLTAP09496 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.56■□□□□ 0.4
CLTAP09496 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLTAP09496 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.55■□□□□ 0.4
CLTAP09496 AC023824.1-201ENST00000562945 2975 ntBASIC17.55■□□□□ 0.4
CLTAP09496 AC007950.2-201ENST00000615045 2347 ntBASIC17.55■□□□□ 0.4
CLTAP09496 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLTAP09496 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLTAP09496 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.55■□□□□ 0.4
CLTAP09496 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.55■□□□□ 0.4
CLTAP09496 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.55■□□□□ 0.4
CLTAP09496 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLTAP09496 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.55■□□□□ 0.4
CLTAP09496 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLTAP09496 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLTAP09496 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.55■□□□□ 0.4
CLTAP09496 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLTAP09496 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLTAP09496 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLTAP09496 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CLTAP09496 RPL37AP1-201ENST00000412502 279 ntBASIC17.55■□□□□ 0.4
CLTAP09496 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLTAP09496 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.55■□□□□ 0.4
CLTAP09496 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLTAP09496 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.55■□□□□ 0.4
CLTAP09496 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.55■□□□□ 0.4
CLTAP09496 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLTAP09496 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLTAP09496 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.55■□□□□ 0.4
CLTAP09496 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLTAP09496 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLTAP09496 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLTAP09496 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLTAP09496 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLTAP09496 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLTAP09496 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLTAP09496 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLTAP09496 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.55■□□□□ 0.4
CLTAP09496 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLTAP09496 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLTAP09496 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CLTAP09496 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLTAP09496 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLTAP09496 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLTAP09496 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLTAP09496 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CLTAP09496 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CLTAP09496 AL136379.1-201ENST00000623471 2642 ntBASIC17.54■□□□□ 0.4
CLTAP09496 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.54■□□□□ 0.4
CLTAP09496 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLTAP09496 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CLTAP09496 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLTAP09496 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.54■□□□□ 0.4
CLTAP09496 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.54■□□□□ 0.4
CLTAP09496 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CLTAP09496 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLTAP09496 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLTAP09496 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.54■□□□□ 0.4
CLTAP09496 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLTAP09496 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CLTAP09496 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLTAP09496 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLTAP09496 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLTAP09496 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLTAP09496 SPDYE17-201ENST00000412399 783 ntBASIC17.54■□□□□ 0.4
CLTAP09496 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.54■□□□□ 0.4
CLTAP09496 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.54■□□□□ 0.4
CLTAP09496 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CLTAP09496 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.54■□□□□ 0.4
CLTAP09496 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.54■□□□□ 0.4
CLTAP09496 AL096865.1-201ENST00000606796 927 ntBASIC17.54■□□□□ 0.4
CLTAP09496 TEX28P1-201ENST00000613479 1221 ntBASIC17.54■□□□□ 0.4
CLTAP09496 TEX28P2-201ENST00000617764 1221 ntBASIC17.54■□□□□ 0.4
CLTAP09496 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CLTAP09496 AL590560.3-201ENST00000623350 461 ntBASIC17.54■□□□□ 0.4
CLTAP09496 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLTAP09496 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLTAP09496 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CLTAP09496 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CLTAP09496 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CLTAP09496 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLTAP09496 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.54■□□□□ 0.4
CLTAP09496 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLTAP09496 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLTAP09496 AC100757.3-201ENST00000622361 1406 ntBASIC17.54■□□□□ 0.4
CLTAP09496 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLTAP09496 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.54■□□□□ 0.4
CLTAP09496 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.54■□□□□ 0.4
CLTAP09496 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLTAP09496 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CLTAP09496 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.54■□□□□ 0.4
CLTAP09496 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.54■□□□□ 0.4
CLTAP09496 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLTAP09496 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLTAP09496 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLTAP09496 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms