Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
APOA4P06727 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APOA4P06727 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
APOA4P06727 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
APOA4P06727 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
APOA4P06727 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APOA4P06727 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.1■□□□□ 0.17
APOA4P06727 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
APOA4P06727 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APOA4P06727 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
APOA4P06727 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APOA4P06727 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.1■□□□□ 0.17
APOA4P06727 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
APOA4P06727 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APOA4P06727 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
APOA4P06727 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.1■□□□□ 0.17
APOA4P06727 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.1■□□□□ 0.17
APOA4P06727 RPSAP43-201ENST00000402237 625 ntBASIC16.1■□□□□ 0.17
APOA4P06727 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.1■□□□□ 0.17
APOA4P06727 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.1■□□□□ 0.17
APOA4P06727 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.1■□□□□ 0.17
APOA4P06727 AC112482.1-201ENST00000492080 688 ntBASIC16.1■□□□□ 0.17
APOA4P06727 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
APOA4P06727 AC079140.1-201ENST00000508039 487 ntBASIC16.1■□□□□ 0.17
APOA4P06727 YBX1P5-201ENST00000509441 847 ntBASIC16.1■□□□□ 0.17
APOA4P06727 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.1■□□□□ 0.17
APOA4P06727 IGHV3-62-201ENST00000520057 340 ntBASIC16.1■□□□□ 0.17
APOA4P06727 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.1■□□□□ 0.17
APOA4P06727 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.1■□□□□ 0.17
APOA4P06727 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.1■□□□□ 0.17
APOA4P06727 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
APOA4P06727 MIR4469-201ENST00000583919 79 ntBASIC16.1■□□□□ 0.17
APOA4P06727 AC027307.2-201ENST00000591252 911 ntBASIC16.1■□□□□ 0.17
APOA4P06727 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
APOA4P06727 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.1■□□□□ 0.17
APOA4P06727 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.1■□□□□ 0.17
APOA4P06727 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APOA4P06727 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
APOA4P06727 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
APOA4P06727 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APOA4P06727 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.1■□□□□ 0.17
APOA4P06727 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
APOA4P06727 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
APOA4P06727 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APOA4P06727 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APOA4P06727 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.09■□□□□ 0.17
APOA4P06727 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
APOA4P06727 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
APOA4P06727 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
APOA4P06727 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
APOA4P06727 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
APOA4P06727 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
APOA4P06727 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
APOA4P06727 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.09■□□□□ 0.17
APOA4P06727 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.09■□□□□ 0.17
APOA4P06727 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
APOA4P06727 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
APOA4P06727 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
APOA4P06727 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.09■□□□□ 0.17
APOA4P06727 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
APOA4P06727 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
APOA4P06727 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
APOA4P06727 TMBIM7P-203ENST00000641617 1718 ntBASIC16.09■□□□□ 0.17
APOA4P06727 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
APOA4P06727 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
APOA4P06727 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
APOA4P06727 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.09■□□□□ 0.17
APOA4P06727 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.09■□□□□ 0.17
APOA4P06727 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
APOA4P06727 KRT8P48-201ENST00000515599 1220 ntBASIC16.09■□□□□ 0.17
APOA4P06727 AC243562.1-201ENST00000560672 389 ntBASIC16.09■□□□□ 0.17
APOA4P06727 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.09■□□□□ 0.17
APOA4P06727 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.09■□□□□ 0.17
APOA4P06727 AL138918.1-201ENST00000568306 659 ntBASIC16.09■□□□□ 0.17
APOA4P06727 AC073389.1-201ENST00000595595 795 ntBASIC16.09■□□□□ 0.17
APOA4P06727 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.09■□□□□ 0.17
APOA4P06727 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.09■□□□□ 0.17
APOA4P06727 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
APOA4P06727 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.09■□□□□ 0.17
APOA4P06727 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
APOA4P06727 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.09■□□□□ 0.17
APOA4P06727 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
APOA4P06727 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.09■□□□□ 0.17
APOA4P06727 AC020658.6-201ENST00000623564 1870 ntBASIC16.09■□□□□ 0.17
APOA4P06727 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
APOA4P06727 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
APOA4P06727 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
APOA4P06727 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.09■□□□□ 0.17
APOA4P06727 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
APOA4P06727 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
APOA4P06727 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
APOA4P06727 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.09■□□□□ 0.17
APOA4P06727 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.09■□□□□ 0.17
APOA4P06727 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.09■□□□□ 0.17
APOA4P06727 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
APOA4P06727 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.09■□□□□ 0.17
APOA4P06727 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.09■□□□□ 0.17
APOA4P06727 AC013268.4-201ENST00000637413 2228 ntBASIC16.09■□□□□ 0.17
APOA4P06727 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
APOA4P06727 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms