Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPNS1P04632 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPNS1P04632 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPNS1P04632 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.97■□□□□ 0.15
CAPNS1P04632 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPNS1P04632 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.97■□□□□ 0.15
CAPNS1P04632 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPNS1P04632 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CAPNS1P04632 DBET-201ENST00000630918 3363 ntBASIC15.96■□□□□ 0.15
CAPNS1P04632 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPNS1P04632 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CAPNS1P04632 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPNS1P04632 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.96■□□□□ 0.15
CAPNS1P04632 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.96■□□□□ 0.15
CAPNS1P04632 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.96■□□□□ 0.15
CAPNS1P04632 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
CAPNS1P04632 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.96■□□□□ 0.15
CAPNS1P04632 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPNS1P04632 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPNS1P04632 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPNS1P04632 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
CAPNS1P04632 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CAPNS1P04632 REXO1L6P-201ENST00000603433 1515 ntBASIC15.96■□□□□ 0.15
CAPNS1P04632 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPNS1P04632 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPNS1P04632 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPNS1P04632 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CAPNS1P04632 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
CAPNS1P04632 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.96■□□□□ 0.15
CAPNS1P04632 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPNS1P04632 RN7SL752P-201ENST00000463779 287 ntBASIC15.96■□□□□ 0.15
CAPNS1P04632 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CAPNS1P04632 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CAPNS1P04632 FAM8A2P-201ENST00000528813 1142 ntBASIC15.96■□□□□ 0.15
CAPNS1P04632 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPNS1P04632 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CAPNS1P04632 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPNS1P04632 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.96■□□□□ 0.15
CAPNS1P04632 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.96■□□□□ 0.15
CAPNS1P04632 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CAPNS1P04632 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
CAPNS1P04632 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
CAPNS1P04632 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CAPNS1P04632 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CAPNS1P04632 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CAPNS1P04632 AP005117.1-202ENST00000581724 1908 ntBASIC15.96■□□□□ 0.14
CAPNS1P04632 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.95■□□□□ 0.14
CAPNS1P04632 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CAPNS1P04632 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CAPNS1P04632 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
CAPNS1P04632 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CAPNS1P04632 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CAPNS1P04632 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPNS1P04632 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPNS1P04632 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
CAPNS1P04632 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CAPNS1P04632 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.95■□□□□ 0.14
CAPNS1P04632 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.95■□□□□ 0.14
CAPNS1P04632 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CAPNS1P04632 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.95■□□□□ 0.14
CAPNS1P04632 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CAPNS1P04632 AP006294.1-201ENST00000415407 339 ntBASIC15.95■□□□□ 0.14
CAPNS1P04632 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.95■□□□□ 0.14
CAPNS1P04632 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPNS1P04632 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.95■□□□□ 0.14
CAPNS1P04632 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CAPNS1P04632 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.95■□□□□ 0.14
CAPNS1P04632 AL844908.2-201ENST00000609461 460 ntBASIC15.95■□□□□ 0.14
CAPNS1P04632 AC018529.1-201ENST00000613063 361 ntBASIC15.95■□□□□ 0.14
CAPNS1P04632 AC007967.4-201ENST00000614700 386 ntBASIC15.95■□□□□ 0.14
CAPNS1P04632 AC004840.1-201ENST00000636359 365 ntBASIC15.95■□□□□ 0.14
CAPNS1P04632 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPNS1P04632 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPNS1P04632 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPNS1P04632 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPNS1P04632 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.95■□□□□ 0.14
CAPNS1P04632 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.95■□□□□ 0.14
CAPNS1P04632 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.95■□□□□ 0.14
CAPNS1P04632 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPNS1P04632 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPNS1P04632 AC068418.2-201ENST00000577309 3703 ntBASIC15.95■□□□□ 0.14
CAPNS1P04632 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPNS1P04632 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPNS1P04632 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPNS1P04632 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPNS1P04632 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.95■□□□□ 0.14
CAPNS1P04632 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.95■□□□□ 0.14
CAPNS1P04632 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPNS1P04632 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CAPNS1P04632 TUBB8P12-201ENST00000308911 1335 ntBASIC15.94■□□□□ 0.14
CAPNS1P04632 TUBB7P-202ENST00000428444 1305 ntBASIC15.94■□□□□ 0.14
CAPNS1P04632 TUBB8P7-204ENST00000567960 1332 ntBASIC15.94■□□□□ 0.14
CAPNS1P04632 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.94■□□□□ 0.14
CAPNS1P04632 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.94■□□□□ 0.14
CAPNS1P04632 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CAPNS1P04632 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.94■□□□□ 0.14
CAPNS1P04632 AC010491.1-201ENST00000563101 2797 ntBASIC15.94■□□□□ 0.14
CAPNS1P04632 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CAPNS1P04632 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CAPNS1P04632 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms