Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 AL365209.1-201ENST00000624418 6473 ntBASIC15.15■□□□□ 0.02
SNX4O95219 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.15■□□□□ 0.02
SNX4O95219 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SNX4O95219 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX4O95219 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.15■□□□□ 0.02
SNX4O95219 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SNX4O95219 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX4O95219 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SNX4O95219 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX4O95219 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SNX4O95219 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX4O95219 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX4O95219 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX4O95219 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SNX4O95219 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.15■□□□□ 0.02
SNX4O95219 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.15■□□□□ 0.02
SNX4O95219 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SNX4O95219 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SNX4O95219 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SNX4O95219 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX4O95219 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SNX4O95219 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SNX4O95219 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNX4O95219 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNX4O95219 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.14■□□□□ 0.01
SNX4O95219 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNX4O95219 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNX4O95219 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNX4O95219 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SNX4O95219 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SNX4O95219 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SNX4O95219 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNX4O95219 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SNX4O95219 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.14■□□□□ 0.01
SNX4O95219 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNX4O95219 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SNX4O95219 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNX4O95219 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNX4O95219 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.14■□□□□ 0.01
SNX4O95219 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNX4O95219 AC005237.2-201ENST00000434368 219 ntBASIC15.14■□□□□ 0.01
SNX4O95219 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.14■□□□□ 0.01
SNX4O95219 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.14■□□□□ 0.01
SNX4O95219 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.14■□□□□ 0.01
SNX4O95219 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SNX4O95219 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.14■□□□□ 0.01
SNX4O95219 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.14■□□□□ 0.01
SNX4O95219 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNX4O95219 AC020765.3-201ENST00000613051 740 ntBASIC15.14■□□□□ 0.01
SNX4O95219 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.14■□□□□ 0.01
SNX4O95219 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.14■□□□□ 0.01
SNX4O95219 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNX4O95219 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNX4O95219 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.14■□□□□ 0.01
SNX4O95219 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.14■□□□□ 0.01
SNX4O95219 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.14■□□□□ 0.01
SNX4O95219 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNX4O95219 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.14■□□□□ 0.01
SNX4O95219 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.14■□□□□ 0.01
SNX4O95219 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNX4O95219 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNX4O95219 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNX4O95219 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNX4O95219 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SNX4O95219 TNRC18P2-201ENST00000417666 2714 ntBASIC15.14■□□□□ 0.01
SNX4O95219 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SNX4O95219 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.14■□□□□ 0.01
SNX4O95219 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SNX4O95219 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.13■□□□□ 0.01
SNX4O95219 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SNX4O95219 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SNX4O95219 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SNX4O95219 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SNX4O95219 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.13■□□□□ 0.01
SNX4O95219 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SNX4O95219 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SNX4O95219 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.13■□□□□ 0.01
SNX4O95219 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SNX4O95219 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SNX4O95219 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SNX4O95219 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SNX4O95219 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.13■□□□□ 0.01
SNX4O95219 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SNX4O95219 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SNX4O95219 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SNX4O95219 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.13■□□□□ 0.01
SNX4O95219 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.13■□□□□ 0.01
SNX4O95219 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.13■□□□□ 0.01
SNX4O95219 SPCS2P4-201ENST00000436160 681 ntBASIC15.13■□□□□ 0.01
SNX4O95219 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.13■□□□□ 0.01
SNX4O95219 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.13■□□□□ 0.01
SNX4O95219 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SNX4O95219 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.13■□□□□ 0.01
SNX4O95219 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.13■□□□□ 0.01
SNX4O95219 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
SNX4O95219 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SNX4O95219 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SNX4O95219 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SNX4O95219 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SNX4O95219 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms