Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.75□□□□□ -0.05
NKX2-2O95096 AC015911.4-201ENST00000588022 1070 ntBASIC14.75□□□□□ -0.05
NKX2-2O95096 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.75□□□□□ -0.05
NKX2-2O95096 Z92544.3-201ENST00000624747 417 ntBASIC14.75□□□□□ -0.05
NKX2-2O95096 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.75□□□□□ -0.05
NKX2-2O95096 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-2O95096 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-2O95096 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-2O95096 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-2O95096 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.75□□□□□ -0.05
NKX2-2O95096 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-2O95096 AL162727.3-201ENST00000635661 2787 ntBASIC14.75□□□□□ -0.05
NKX2-2O95096 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-2O95096 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-2O95096 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.75□□□□□ -0.05
NKX2-2O95096 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-2O95096 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-2O95096 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.75□□□□□ -0.05
NKX2-2O95096 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-2O95096 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-2O95096 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-2O95096 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-2O95096 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-2O95096 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
NKX2-2O95096 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-2O95096 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
NKX2-2O95096 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
NKX2-2O95096 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.74□□□□□ -0.05
NKX2-2O95096 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.74□□□□□ -0.05
NKX2-2O95096 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
NKX2-2O95096 CETN4P-206ENST00000642099 2168 ntBASIC14.74□□□□□ -0.05
NKX2-2O95096 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-2O95096 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-2O95096 AC020658.6-201ENST00000623564 1870 ntBASIC14.74□□□□□ -0.05
NKX2-2O95096 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-2O95096 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
NKX2-2O95096 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.74□□□□□ -0.05
NKX2-2O95096 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-2O95096 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-2O95096 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
NKX2-2O95096 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-2O95096 CNN2P2-201ENST00000443536 909 ntBASIC14.74□□□□□ -0.05
NKX2-2O95096 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-2O95096 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-2O95096 CNN2P3-201ENST00000450201 906 ntBASIC14.74□□□□□ -0.05
NKX2-2O95096 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.74□□□□□ -0.05
NKX2-2O95096 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.74□□□□□ -0.05
NKX2-2O95096 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-2O95096 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-2O95096 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.74□□□□□ -0.05
NKX2-2O95096 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.74□□□□□ -0.05
NKX2-2O95096 AC004449.1-201ENST00000564240 433 ntBASIC14.74□□□□□ -0.05
NKX2-2O95096 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.74□□□□□ -0.05
NKX2-2O95096 AL589739.1-201ENST00000607720 493 ntBASIC14.74□□□□□ -0.05
NKX2-2O95096 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.74□□□□□ -0.05
NKX2-2O95096 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
NKX2-2O95096 AL136317.3-201ENST00000618497 906 ntBASIC14.74□□□□□ -0.05
NKX2-2O95096 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.74□□□□□ -0.05
NKX2-2O95096 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-2O95096 CICP13-201ENST00000422015 2789 ntBASIC14.74□□□□□ -0.05
NKX2-2O95096 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-2O95096 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.74□□□□□ -0.05
NKX2-2O95096 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.74□□□□□ -0.05
NKX2-2O95096 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-2O95096 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.74□□□□□ -0.05
NKX2-2O95096 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
NKX2-2O95096 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-2O95096 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-2O95096 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-2O95096 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
NKX2-2O95096 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.74□□□□□ -0.05
NKX2-2O95096 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-2O95096 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-2O95096 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.73□□□□□ -0.05
NKX2-2O95096 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-2O95096 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-2O95096 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-2O95096 TUBB3P1-201ENST00000405796 1332 ntBASIC14.73□□□□□ -0.05
NKX2-2O95096 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-2O95096 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.73□□□□□ -0.05
NKX2-2O95096 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-2O95096 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-2O95096 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-2O95096 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
NKX2-2O95096 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-2O95096 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-2O95096 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
NKX2-2O95096 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-2O95096 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-2O95096 AL080243.2-201ENST00000418783 582 ntBASIC14.73□□□□□ -0.05
NKX2-2O95096 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-2O95096 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
NKX2-2O95096 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.73□□□□□ -0.05
NKX2-2O95096 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-2O95096 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.73□□□□□ -0.05
NKX2-2O95096 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-2O95096 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-2O95096 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-2O95096 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
NKX2-2O95096 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms