Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
SMARCA5O60264 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.74■□□□□ 0.75
SMARCA5O60264 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.74■□□□□ 0.75
SMARCA5O60264 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCA5O60264 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC19.74■□□□□ 0.75
SMARCA5O60264 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCA5O60264 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SMARCA5O60264 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCA5O60264 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCA5O60264 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCA5O60264 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCA5O60264 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SMARCA5O60264 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCA5O60264 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC19.73■□□□□ 0.75
SMARCA5O60264 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCA5O60264 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCA5O60264 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCA5O60264 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC19.73■□□□□ 0.75
SMARCA5O60264 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
SMARCA5O60264 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCA5O60264 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCA5O60264 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCA5O60264 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCA5O60264 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCA5O60264 HIST3H2BA-201ENST00000436555 524 ntBASIC19.73■□□□□ 0.75
SMARCA5O60264 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCA5O60264 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.73■□□□□ 0.75
SMARCA5O60264 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.73■□□□□ 0.75
SMARCA5O60264 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.73■□□□□ 0.75
SMARCA5O60264 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.73■□□□□ 0.75
SMARCA5O60264 AC026979.3-201ENST00000607315 403 ntBASIC19.73■□□□□ 0.75
SMARCA5O60264 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCA5O60264 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.73■□□□□ 0.75
SMARCA5O60264 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SMARCA5O60264 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCA5O60264 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCA5O60264 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.73■□□□□ 0.75
SMARCA5O60264 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCA5O60264 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCA5O60264 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCA5O60264 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCA5O60264 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SMARCA5O60264 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCA5O60264 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCA5O60264 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCA5O60264 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCA5O60264 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCA5O60264 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCA5O60264 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCA5O60264 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.72■□□□□ 0.75
SMARCA5O60264 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SMARCA5O60264 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCA5O60264 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCA5O60264 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCA5O60264 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCA5O60264 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCA5O60264 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SMARCA5O60264 SPDYE7P-202ENST00000420373 878 ntBASIC19.72■□□□□ 0.75
SMARCA5O60264 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCA5O60264 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.72■□□□□ 0.75
SMARCA5O60264 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCA5O60264 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCA5O60264 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCA5O60264 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.72■□□□□ 0.75
SMARCA5O60264 GPALPP1-207ENST00000611650 899 ntBASIC19.72■□□□□ 0.75
SMARCA5O60264 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.72■□□□□ 0.75
SMARCA5O60264 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCA5O60264 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.72■□□□□ 0.75
SMARCA5O60264 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SMARCA5O60264 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SMARCA5O60264 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.72■□□□□ 0.75
SMARCA5O60264 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCA5O60264 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCA5O60264 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCA5O60264 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCA5O60264 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCA5O60264 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SMARCA5O60264 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SMARCA5O60264 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SMARCA5O60264 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.72■□□□□ 0.75
SMARCA5O60264 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCA5O60264 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SMARCA5O60264 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCA5O60264 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCA5O60264 TUBB3P1-201ENST00000405796 1332 ntBASIC19.72■□□□□ 0.75
SMARCA5O60264 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SMARCA5O60264 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCA5O60264 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCA5O60264 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCA5O60264 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCA5O60264 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC19.71■□□□□ 0.75
SMARCA5O60264 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCA5O60264 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCA5O60264 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
SMARCA5O60264 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SMARCA5O60264 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCA5O60264 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC19.71■□□□□ 0.75
SMARCA5O60264 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
SMARCA5O60264 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCA5O60264 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms