Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PEX1O43933 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PEX1O43933 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PEX1O43933 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.73■□□□□ 0.11
PEX1O43933 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PEX1O43933 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PEX1O43933 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PEX1O43933 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PEX1O43933 AL161772.1-201ENST00000610494 4412 ntBASIC15.72■□□□□ 0.11
PEX1O43933 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.72■□□□□ 0.11
PEX1O43933 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PEX1O43933 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PEX1O43933 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.72■□□□□ 0.11
PEX1O43933 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.72■□□□□ 0.11
PEX1O43933 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PEX1O43933 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PEX1O43933 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
PEX1O43933 AC020658.6-201ENST00000623564 1870 ntBASIC15.72■□□□□ 0.11
PEX1O43933 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PEX1O43933 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PEX1O43933 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PEX1O43933 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PEX1O43933 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PEX1O43933 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PEX1O43933 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PEX1O43933 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.72■□□□□ 0.11
PEX1O43933 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PEX1O43933 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PEX1O43933 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.72■□□□□ 0.11
PEX1O43933 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.72■□□□□ 0.11
PEX1O43933 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.72■□□□□ 0.11
PEX1O43933 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.72■□□□□ 0.11
PEX1O43933 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.72■□□□□ 0.11
PEX1O43933 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.72■□□□□ 0.11
PEX1O43933 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.72■□□□□ 0.11
PEX1O43933 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PEX1O43933 AC112482.1-201ENST00000492080 688 ntBASIC15.72■□□□□ 0.11
PEX1O43933 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.72■□□□□ 0.11
PEX1O43933 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.72■□□□□ 0.11
PEX1O43933 AC018845.2-201ENST00000568326 409 ntBASIC15.72■□□□□ 0.11
PEX1O43933 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.72■□□□□ 0.11
PEX1O43933 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PEX1O43933 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PEX1O43933 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PEX1O43933 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
PEX1O43933 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PEX1O43933 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PEX1O43933 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PEX1O43933 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PEX1O43933 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PEX1O43933 LINC01101-201ENST00000622953 1884 ntBASIC15.71■□□□□ 0.11
PEX1O43933 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PEX1O43933 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PEX1O43933 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PEX1O43933 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PEX1O43933 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PEX1O43933 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PEX1O43933 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PEX1O43933 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PEX1O43933 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PEX1O43933 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PEX1O43933 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PEX1O43933 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PEX1O43933 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PEX1O43933 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PEX1O43933 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PEX1O43933 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PEX1O43933 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.71■□□□□ 0.11
PEX1O43933 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PEX1O43933 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PEX1O43933 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PEX1O43933 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PEX1O43933 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.71■□□□□ 0.11
PEX1O43933 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PEX1O43933 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PEX1O43933 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PEX1O43933 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PEX1O43933 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.71■□□□□ 0.11
PEX1O43933 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.71■□□□□ 0.11
PEX1O43933 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.71■□□□□ 0.11
PEX1O43933 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.71■□□□□ 0.11
PEX1O43933 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.71■□□□□ 0.11
PEX1O43933 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.71■□□□□ 0.11
PEX1O43933 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
PEX1O43933 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PEX1O43933 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PEX1O43933 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
PEX1O43933 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.71■□□□□ 0.11
PEX1O43933 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PEX1O43933 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PEX1O43933 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PEX1O43933 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.71■□□□□ 0.1
PEX1O43933 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
PEX1O43933 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PEX1O43933 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PEX1O43933 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PEX1O43933 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PEX1O43933 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.7■□□□□ 0.1
PEX1O43933 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PEX1O43933 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms