Protein–RNA interactions for Protein: O15554

KCNN4, Intermediate conductance calcium-activated potassium channel protein 4, humanhuman

Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4O15554 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KCNN4O15554 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KCNN4O15554 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KCNN4O15554 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
KCNN4O15554 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KCNN4O15554 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
KCNN4O15554 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
KCNN4O15554 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.5■□□□□ 0.23
KCNN4O15554 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.5■□□□□ 0.23
KCNN4O15554 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KCNN4O15554 SPCS2P4-201ENST00000436160 681 ntBASIC16.5■□□□□ 0.23
KCNN4O15554 TIMM8BP1-201ENST00000452384 211 ntBASIC16.5■□□□□ 0.23
KCNN4O15554 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.5■□□□□ 0.23
KCNN4O15554 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.5■□□□□ 0.23
KCNN4O15554 AC079140.1-201ENST00000508039 487 ntBASIC16.5■□□□□ 0.23
KCNN4O15554 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
KCNN4O15554 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.5■□□□□ 0.23
KCNN4O15554 AC243562.2-201ENST00000561247 970 ntBASIC16.5■□□□□ 0.23
KCNN4O15554 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.5■□□□□ 0.23
KCNN4O15554 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.5■□□□□ 0.23
KCNN4O15554 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.5■□□□□ 0.23
KCNN4O15554 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.5■□□□□ 0.23
KCNN4O15554 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.5■□□□□ 0.23
KCNN4O15554 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.5■□□□□ 0.23
KCNN4O15554 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KCNN4O15554 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.5■□□□□ 0.23
KCNN4O15554 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KCNN4O15554 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KCNN4O15554 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KCNN4O15554 AL596257.1-201ENST00000641463 2694 ntBASIC16.5■□□□□ 0.23
KCNN4O15554 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
KCNN4O15554 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KCNN4O15554 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.5■□□□□ 0.23
KCNN4O15554 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.5■□□□□ 0.23
KCNN4O15554 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KCNN4O15554 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
KCNN4O15554 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KCNN4O15554 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KCNN4O15554 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
KCNN4O15554 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KCNN4O15554 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KCNN4O15554 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KCNN4O15554 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KCNN4O15554 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.49■□□□□ 0.23
KCNN4O15554 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.49■□□□□ 0.23
KCNN4O15554 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.49■□□□□ 0.23
KCNN4O15554 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KCNN4O15554 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
KCNN4O15554 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KCNN4O15554 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KCNN4O15554 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KCNN4O15554 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KCNN4O15554 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
KCNN4O15554 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KCNN4O15554 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KCNN4O15554 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
KCNN4O15554 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
KCNN4O15554 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.49■□□□□ 0.23
KCNN4O15554 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
KCNN4O15554 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.49■□□□□ 0.23
KCNN4O15554 IGHV3-62-201ENST00000520057 340 ntBASIC16.49■□□□□ 0.23
KCNN4O15554 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.49■□□□□ 0.23
KCNN4O15554 AP000842.3-202ENST00000569238 1080 ntBASIC16.49■□□□□ 0.23
KCNN4O15554 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.49■□□□□ 0.23
KCNN4O15554 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.49■□□□□ 0.23
KCNN4O15554 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.49■□□□□ 0.23
KCNN4O15554 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
KCNN4O15554 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.49■□□□□ 0.23
KCNN4O15554 C20orf181-201ENST00000623918 480 ntBASIC16.49■□□□□ 0.23
KCNN4O15554 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KCNN4O15554 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
KCNN4O15554 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KCNN4O15554 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
KCNN4O15554 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
KCNN4O15554 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KCNN4O15554 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KCNN4O15554 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KCNN4O15554 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KCNN4O15554 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KCNN4O15554 AC013268.4-201ENST00000637413 2228 ntBASIC16.49■□□□□ 0.23
KCNN4O15554 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KCNN4O15554 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KCNN4O15554 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
KCNN4O15554 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.49■□□□□ 0.23
KCNN4O15554 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.49■□□□□ 0.23
KCNN4O15554 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KCNN4O15554 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KCNN4O15554 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KCNN4O15554 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KCNN4O15554 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KCNN4O15554 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KCNN4O15554 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
KCNN4O15554 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
KCNN4O15554 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.48■□□□□ 0.23
KCNN4O15554 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KCNN4O15554 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
KCNN4O15554 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.48■□□□□ 0.23
KCNN4O15554 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KCNN4O15554 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KCNN4O15554 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms