Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TNRC18O15417 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TNRC18O15417 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC16.86■□□□□ 0.29
TNRC18O15417 AL136309.1-201ENST00000403917 691 ntBASIC16.86■□□□□ 0.29
TNRC18O15417 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TNRC18O15417 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNRC18O15417 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.86■□□□□ 0.29
TNRC18O15417 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.86■□□□□ 0.29
TNRC18O15417 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TNRC18O15417 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TNRC18O15417 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
TNRC18O15417 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TNRC18O15417 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.86■□□□□ 0.29
TNRC18O15417 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.86■□□□□ 0.29
TNRC18O15417 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNRC18O15417 STK16-203ENST00000409516 895 ntTSL 2 BASIC16.86■□□□□ 0.29
TNRC18O15417 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC16.86■□□□□ 0.29
TNRC18O15417 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.86■□□□□ 0.29
TNRC18O15417 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TNRC18O15417 AL512324.3-201ENST00000619383 882 ntBASIC16.86■□□□□ 0.29
TNRC18O15417 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNRC18O15417 BNIP3P1-202ENST00000550043 1585 ntBASIC16.85■□□□□ 0.29
TNRC18O15417 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNRC18O15417 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNRC18O15417 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TNRC18O15417 AC009053.2-201ENST00000563701 2365 ntBASIC16.85■□□□□ 0.29
TNRC18O15417 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNRC18O15417 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TNRC18O15417 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TNRC18O15417 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TNRC18O15417 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNRC18O15417 MED11-202ENST00000573708 802 ntTSL 2 BASIC16.85■□□□□ 0.29
TNRC18O15417 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC16.85■□□□□ 0.29
TNRC18O15417 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.85■□□□□ 0.29
TNRC18O15417 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.85■□□□□ 0.29
TNRC18O15417 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNRC18O15417 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNRC18O15417 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TNRC18O15417 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.85■□□□□ 0.29
TNRC18O15417 RPL8P2-201ENST00000430538 502 ntBASIC16.85■□□□□ 0.29
TNRC18O15417 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.85■□□□□ 0.29
TNRC18O15417 GDNF-207ENST00000515058 764 ntTSL 5 BASIC16.85■□□□□ 0.29
TNRC18O15417 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TNRC18O15417 AC004466.2-201ENST00000614749 516 ntBASIC16.85■□□□□ 0.29
TNRC18O15417 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TNRC18O15417 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNRC18O15417 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNRC18O15417 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.85■□□□□ 0.29
TNRC18O15417 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TNRC18O15417 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.85■□□□□ 0.29
TNRC18O15417 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
TNRC18O15417 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.85■□□□□ 0.29
TNRC18O15417 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.85■□□□□ 0.29
TNRC18O15417 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.85■□□□□ 0.29
TNRC18O15417 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TNRC18O15417 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.84■□□□□ 0.29
TNRC18O15417 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.84■□□□□ 0.29
TNRC18O15417 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.84■□□□□ 0.29
TNRC18O15417 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNRC18O15417 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC16.84■□□□□ 0.29
TNRC18O15417 MIR557-201ENST00000385239 98 ntBASIC16.84■□□□□ 0.29
TNRC18O15417 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC16.84■□□□□ 0.29
TNRC18O15417 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC16.84■□□□□ 0.29
TNRC18O15417 HLA-J-204ENST00000495278 958 ntBASIC16.84■□□□□ 0.29
TNRC18O15417 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TNRC18O15417 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNRC18O15417 AL691432.1-201ENST00000596308 1422 ntBASIC16.84■□□□□ 0.29
TNRC18O15417 AC092053.1-201ENST00000605787 1936 ntBASIC16.84■□□□□ 0.29
TNRC18O15417 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.84■□□□□ 0.29
TNRC18O15417 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TNRC18O15417 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNRC18O15417 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TNRC18O15417 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNRC18O15417 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNRC18O15417 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNRC18O15417 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.84■□□□□ 0.29
TNRC18O15417 AC092638.2-201ENST00000441105 947 ntBASIC16.84■□□□□ 0.29
TNRC18O15417 AC026470.1-201ENST00000478038 846 ntBASIC16.84■□□□□ 0.29
TNRC18O15417 ABHD17AP9-201ENST00000561925 548 ntBASIC16.84■□□□□ 0.29
TNRC18O15417 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC16.84■□□□□ 0.29
TNRC18O15417 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TNRC18O15417 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TNRC18O15417 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TNRC18O15417 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.84■□□□□ 0.29
TNRC18O15417 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.84■□□□□ 0.29
TNRC18O15417 AC133963.1-201ENST00000504166 1679 ntBASIC16.84■□□□□ 0.29
TNRC18O15417 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNRC18O15417 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNRC18O15417 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNRC18O15417 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNRC18O15417 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.84■□□□□ 0.29
TNRC18O15417 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TNRC18O15417 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
TNRC18O15417 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.83■□□□□ 0.29
TNRC18O15417 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.83■□□□□ 0.29
TNRC18O15417 AC023906.1-201ENST00000486386 453 ntBASIC16.83■□□□□ 0.29
TNRC18O15417 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
TNRC18O15417 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.29
TNRC18O15417 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
TNRC18O15417 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms