Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CDC7O00311 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
CDC7O00311 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.74■□□□□ 0.11
CDC7O00311 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDC7O00311 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDC7O00311 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CDC7O00311 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDC7O00311 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.74■□□□□ 0.11
CDC7O00311 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.74■□□□□ 0.11
CDC7O00311 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDC7O00311 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDC7O00311 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CDC7O00311 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.74■□□□□ 0.11
CDC7O00311 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDC7O00311 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CDC7O00311 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDC7O00311 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDC7O00311 HLA-H-201ENST00000383620 1096 ntBASIC15.74■□□□□ 0.11
CDC7O00311 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.74■□□□□ 0.11
CDC7O00311 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CDC7O00311 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.74■□□□□ 0.11
CDC7O00311 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.74■□□□□ 0.11
CDC7O00311 AC005829.1-201ENST00000570002 483 ntBASIC15.74■□□□□ 0.11
CDC7O00311 AC022145.2-201ENST00000598203 171 ntBASIC15.74■□□□□ 0.11
CDC7O00311 AC105339.1-204ENST00000636249 355 ntBASIC15.74■□□□□ 0.11
CDC7O00311 AC084121.4-201ENST00000641598 221 ntBASIC15.74■□□□□ 0.11
CDC7O00311 AF228730.8-201ENST00000642140 221 ntBASIC15.74■□□□□ 0.11
CDC7O00311 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDC7O00311 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDC7O00311 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.74■□□□□ 0.11
CDC7O00311 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.74■□□□□ 0.11
CDC7O00311 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDC7O00311 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDC7O00311 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDC7O00311 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDC7O00311 AC092127.1-201ENST00000567093 3455 ntBASIC15.74■□□□□ 0.11
CDC7O00311 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDC7O00311 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.74■□□□□ 0.11
CDC7O00311 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.74■□□□□ 0.11
CDC7O00311 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDC7O00311 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.73■□□□□ 0.11
CDC7O00311 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDC7O00311 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.73■□□□□ 0.11
CDC7O00311 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.73■□□□□ 0.11
CDC7O00311 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDC7O00311 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDC7O00311 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDC7O00311 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.73■□□□□ 0.11
CDC7O00311 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDC7O00311 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.73■□□□□ 0.11
CDC7O00311 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.73■□□□□ 0.11
CDC7O00311 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDC7O00311 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.73■□□□□ 0.11
CDC7O00311 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDC7O00311 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDC7O00311 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CDC7O00311 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDC7O00311 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CDC7O00311 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
CDC7O00311 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
CDC7O00311 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.73■□□□□ 0.11
CDC7O00311 RPS8P6-201ENST00000426177 609 ntBASIC15.73■□□□□ 0.11
CDC7O00311 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.73■□□□□ 0.11
CDC7O00311 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDC7O00311 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.73■□□□□ 0.11
CDC7O00311 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.73■□□□□ 0.11
CDC7O00311 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.73■□□□□ 0.11
CDC7O00311 MIR4469-201ENST00000583919 79 ntBASIC15.73■□□□□ 0.11
CDC7O00311 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.73■□□□□ 0.11
CDC7O00311 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.73■□□□□ 0.11
CDC7O00311 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CDC7O00311 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.73■□□□□ 0.11
CDC7O00311 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDC7O00311 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CDC7O00311 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDC7O00311 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDC7O00311 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.73■□□□□ 0.11
CDC7O00311 AC020658.6-201ENST00000623564 1870 ntBASIC15.73■□□□□ 0.11
CDC7O00311 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDC7O00311 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDC7O00311 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDC7O00311 SSR4P1-203ENST00000599569 2260 ntBASIC15.73■□□□□ 0.11
CDC7O00311 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDC7O00311 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDC7O00311 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDC7O00311 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.73■□□□□ 0.11
CDC7O00311 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDC7O00311 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDC7O00311 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.72■□□□□ 0.11
CDC7O00311 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.72■□□□□ 0.11
CDC7O00311 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDC7O00311 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDC7O00311 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDC7O00311 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDC7O00311 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDC7O00311 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDC7O00311 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDC7O00311 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.72■□□□□ 0.11
CDC7O00311 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDC7O00311 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms