Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 AC134407.2-201ENST00000625089 1978 ntBASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 INTS4P2-202ENST00000614726 2019 ntBASIC17.14■□□□□ 0.34
PCDHB7Q9Y5E2 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCDHB7Q9Y5E2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 ALOX12P2-203ENST00000570921 1945 ntBASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 BCRP2-202ENST00000447763 634 ntBASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 BCRP6-201ENST00000510112 632 ntBASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 BCRP7-201ENST00000511549 544 ntBASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 REXO1L1P-202ENST00000608646 1974 ntBASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB7Q9Y5E2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 ME2P1-201ENST00000426028 1970 ntBASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 AL049840.4-201ENST00000602422 811 ntBASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB7Q9Y5E2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms