Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 RPL37AP1-201ENST00000412502 279 ntBASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 KLF2P3-201ENST00000451977 1087 ntBASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 AC067863.1-201ENST00000494933 530 ntBASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 AC093028.1-201ENST00000622998 982 ntBASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 KRT18P28-201ENST00000453838 1332 ntBASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGC3Q9UN70 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 AC020658.6-201ENST00000623564 1870 ntBASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 AC125807.1-201ENST00000483097 614 ntBASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 AC140878.1-201ENST00000565277 250 ntBASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 SPDYE12P-201ENST00000618416 771 ntBASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 FO538757.1-201ENST00000623083 1397 ntBASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHGC3Q9UN70 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGC3Q9UN70 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGC3Q9UN70 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGC3Q9UN70 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGC3Q9UN70 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
PCDHGC3Q9UN70 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGC3Q9UN70 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGC3Q9UN70 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.84■□□□□ 0.29
PCDHGC3Q9UN70 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGC3Q9UN70 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGC3Q9UN70 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGC3Q9UN70 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGC3Q9UN70 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGC3Q9UN70 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGC3Q9UN70 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGC3Q9UN70 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PCDHGC3Q9UN70 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGC3Q9UN70 METTL21AP1-201ENST00000438852 635 ntBASIC16.84■□□□□ 0.29
PCDHGC3Q9UN70 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGC3Q9UN70 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDHGC3Q9UN70 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PCDHGC3Q9UN70 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGC3Q9UN70 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDHGC3Q9UN70 AL138828.2-201ENST00000615812 383 ntBASIC16.84■□□□□ 0.29
PCDHGC3Q9UN70 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms