Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 AC044860.1-202ENST00000559481 777 ntBASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 AC061975.2-201ENST00000581722 295 ntBASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 AC024267.1-201ENST00000582320 895 ntBASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 AL008721.1-201ENST00000609964 604 ntBASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 BTBD7P1-201ENST00000447253 1453 ntBASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HDAC6Q9UBN7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 GPAA1P2-202ENST00000606848 1787 ntBASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 AL031731.1-201ENST00000642131 2094 ntBASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 KRT17P7-201ENST00000451704 1104 ntBASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 AC140912.1-201ENST00000577171 1054 ntBASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC6Q9UBN7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms