Protein–RNA interactions for Protein: Q9NXP7

GIN1, Gypsy retrotransposon integrase-like protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1Q9NXP7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 MIR940-201ENST00000401276 94 ntBASIC15.31■□□□□ 0.04
GIN1Q9NXP7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 MED15P5-201ENST00000423150 992 ntBASIC15.31■□□□□ 0.04
GIN1Q9NXP7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 KRT18P34-201ENST00000488218 1270 ntBASIC15.31■□□□□ 0.04
GIN1Q9NXP7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 AC140113.2-201ENST00000604370 208 ntBASIC15.31■□□□□ 0.04
GIN1Q9NXP7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 U82695.1-201ENST00000635752 1889 ntBASIC15.31■□□□□ 0.04
GIN1Q9NXP7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GIN1Q9NXP7 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 AC074386.1-202ENST00000463561 864 ntBASIC15.3■□□□□ 0.04
GIN1Q9NXP7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 AL592424.1-201ENST00000563624 1536 ntBASIC15.3■□□□□ 0.04
GIN1Q9NXP7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 AC068137.2-201ENST00000605408 478 ntBASIC15.3■□□□□ 0.04
GIN1Q9NXP7 AL078644.1-201ENST00000609881 752 ntBASIC15.3■□□□□ 0.04
GIN1Q9NXP7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 AL513190.1-201ENST00000621254 727 ntBASIC15.3■□□□□ 0.04
GIN1Q9NXP7 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GIN1Q9NXP7 AL359258.3-201ENST00000622910 2331 ntBASIC15.29■□□□□ 0.04
GIN1Q9NXP7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.29■□□□□ 0.04
GIN1Q9NXP7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GIN1Q9NXP7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.29■□□□□ 0.04
GIN1Q9NXP7 AL603832.2-201ENST00000566195 2125 ntBASIC15.29■□□□□ 0.04
GIN1Q9NXP7 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.29■□□□□ 0.04
GIN1Q9NXP7 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.29■□□□□ 0.04
GIN1Q9NXP7 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms