Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 AC136604.1-201ENST00000418535 575 ntBASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 CYMP-203ENST00000474680 1263 ntBASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 AL512361.1-201ENST00000554200 418 ntBASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 AC027796.2-201ENST00000575326 344 ntBASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 MIR6069-201ENST00000620069 79 ntBASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 TSSK5P-201ENST00000423978 907 ntBASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 IGHV3-42-201ENST00000520410 361 ntBASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 AC010336.2-201ENST00000564226 506 ntBASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 AC087499.5-201ENST00000452760 1342 ntBASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ECHDC1Q9NTX5 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ECHDC1Q9NTX5 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ECHDC1Q9NTX5 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.44■□□□□ 0.7
ECHDC1Q9NTX5 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ECHDC1Q9NTX5 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ECHDC1Q9NTX5 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ECHDC1Q9NTX5 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ECHDC1Q9NTX5 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.44■□□□□ 0.7
ECHDC1Q9NTX5 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ECHDC1Q9NTX5 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC19.44■□□□□ 0.7
ECHDC1Q9NTX5 AC241585.1-201ENST00000433527 519 ntBASIC19.44■□□□□ 0.7
ECHDC1Q9NTX5 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.44■□□□□ 0.7
ECHDC1Q9NTX5 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.44■□□□□ 0.7
ECHDC1Q9NTX5 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.44■□□□□ 0.7
ECHDC1Q9NTX5 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.44■□□□□ 0.7
ECHDC1Q9NTX5 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.44■□□□□ 0.7
ECHDC1Q9NTX5 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
ECHDC1Q9NTX5 AL844908.2-201ENST00000609461 460 ntBASIC19.44■□□□□ 0.7
ECHDC1Q9NTX5 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.44■□□□□ 0.7
ECHDC1Q9NTX5 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.44■□□□□ 0.7
ECHDC1Q9NTX5 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ECHDC1Q9NTX5 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.44■□□□□ 0.7
ECHDC1Q9NTX5 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
ECHDC1Q9NTX5 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ECHDC1Q9NTX5 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ECHDC1Q9NTX5 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ECHDC1Q9NTX5 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ECHDC1Q9NTX5 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ECHDC1Q9NTX5 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ECHDC1Q9NTX5 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ECHDC1Q9NTX5 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms