Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CISHQ9NSE2 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CISHQ9NSE2 FO393414.2-201ENST00000405153 598 ntBASIC17.06■□□□□ 0.32
CISHQ9NSE2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.06■□□□□ 0.32
CISHQ9NSE2 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CISHQ9NSE2 PHKG1P2-201ENST00000457537 863 ntBASIC17.06■□□□□ 0.32
CISHQ9NSE2 AC027369.6-201ENST00000525520 931 ntBASIC17.06■□□□□ 0.32
CISHQ9NSE2 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.06■□□□□ 0.32
CISHQ9NSE2 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.06■□□□□ 0.32
CISHQ9NSE2 AL450472.2-201ENST00000603663 1156 ntBASIC17.06■□□□□ 0.32
CISHQ9NSE2 TEX28P1-201ENST00000613479 1221 ntBASIC17.06■□□□□ 0.32
CISHQ9NSE2 TEX28P2-201ENST00000617764 1221 ntBASIC17.06■□□□□ 0.32
CISHQ9NSE2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CISHQ9NSE2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CISHQ9NSE2 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.06■□□□□ 0.32
CISHQ9NSE2 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CISHQ9NSE2 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.06■□□□□ 0.32
CISHQ9NSE2 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CISHQ9NSE2 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CISHQ9NSE2 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CISHQ9NSE2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CISHQ9NSE2 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CISHQ9NSE2 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.06■□□□□ 0.32
CISHQ9NSE2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CISHQ9NSE2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CISHQ9NSE2 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CISHQ9NSE2 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CISHQ9NSE2 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.06■□□□□ 0.32
CISHQ9NSE2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CISHQ9NSE2 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CISHQ9NSE2 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.05■□□□□ 0.32
CISHQ9NSE2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CISHQ9NSE2 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CISHQ9NSE2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CISHQ9NSE2 AC132872.4-202ENST00000622924 2756 ntBASIC17.05■□□□□ 0.32
CISHQ9NSE2 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.05■□□□□ 0.32
CISHQ9NSE2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CISHQ9NSE2 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CISHQ9NSE2 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CISHQ9NSE2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CISHQ9NSE2 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.05■□□□□ 0.32
CISHQ9NSE2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.05■□□□□ 0.32
CISHQ9NSE2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CISHQ9NSE2 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.05■□□□□ 0.32
CISHQ9NSE2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CISHQ9NSE2 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CISHQ9NSE2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CISHQ9NSE2 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CISHQ9NSE2 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
CISHQ9NSE2 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CISHQ9NSE2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.05■□□□□ 0.32
CISHQ9NSE2 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CISHQ9NSE2 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.05■□□□□ 0.32
CISHQ9NSE2 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CISHQ9NSE2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CISHQ9NSE2 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CISHQ9NSE2 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CISHQ9NSE2 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CISHQ9NSE2 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CISHQ9NSE2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CISHQ9NSE2 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
CISHQ9NSE2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CISHQ9NSE2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CISHQ9NSE2 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CISHQ9NSE2 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.04■□□□□ 0.32
CISHQ9NSE2 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.04■□□□□ 0.32
CISHQ9NSE2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CISHQ9NSE2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CISHQ9NSE2 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CISHQ9NSE2 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.04■□□□□ 0.32
CISHQ9NSE2 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CISHQ9NSE2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CISHQ9NSE2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.04■□□□□ 0.32
CISHQ9NSE2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CISHQ9NSE2 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.04■□□□□ 0.32
CISHQ9NSE2 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CISHQ9NSE2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CISHQ9NSE2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CISHQ9NSE2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CISHQ9NSE2 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CISHQ9NSE2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CISHQ9NSE2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CISHQ9NSE2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CISHQ9NSE2 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.04■□□□□ 0.32
CISHQ9NSE2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CISHQ9NSE2 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.04■□□□□ 0.32
CISHQ9NSE2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CISHQ9NSE2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CISHQ9NSE2 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CISHQ9NSE2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CISHQ9NSE2 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CISHQ9NSE2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.03■□□□□ 0.32
CISHQ9NSE2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CISHQ9NSE2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.03■□□□□ 0.32
CISHQ9NSE2 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CISHQ9NSE2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CISHQ9NSE2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.03■□□□□ 0.32
CISHQ9NSE2 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.03■□□□□ 0.32
CISHQ9NSE2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.03■□□□□ 0.32
CISHQ9NSE2 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms