Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 AC245100.5-201ENST00000452108 331 ntBASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 SERBP1P3-201ENST00000459980 809 ntBASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 LINC02084-201ENST00000606069 1096 ntBASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ZNF304Q9HCX3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 KRT8P12-202ENST00000472924 1397 ntBASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 SPDYE17-201ENST00000412399 783 ntBASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF304Q9HCX3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF304Q9HCX3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF304Q9HCX3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms