Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
NBPF4Q96M43 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NBPF4Q96M43 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
NBPF4Q96M43 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NBPF4Q96M43 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC20.88■□□□□ 0.93
NBPF4Q96M43 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF4Q96M43 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF4Q96M43 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF4Q96M43 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
NBPF4Q96M43 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC20.88■□□□□ 0.93
NBPF4Q96M43 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
NBPF4Q96M43 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF4Q96M43 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.88■□□□□ 0.93
NBPF4Q96M43 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
NBPF4Q96M43 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF4Q96M43 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF4Q96M43 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF4Q96M43 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF4Q96M43 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC20.88■□□□□ 0.93
NBPF4Q96M43 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF4Q96M43 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF4Q96M43 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC20.88■□□□□ 0.93
NBPF4Q96M43 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC20.88■□□□□ 0.93
NBPF4Q96M43 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC20.88■□□□□ 0.93
NBPF4Q96M43 AC026954.1-201ENST00000429771 1293 ntBASIC20.88■□□□□ 0.93
NBPF4Q96M43 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC20.88■□□□□ 0.93
NBPF4Q96M43 KRT18P43-201ENST00000469825 1281 ntBASIC20.88■□□□□ 0.93
NBPF4Q96M43 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC20.88■□□□□ 0.93
NBPF4Q96M43 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC20.88■□□□□ 0.93
NBPF4Q96M43 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC20.88■□□□□ 0.93
NBPF4Q96M43 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NBPF4Q96M43 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF4Q96M43 METTL26-214ENST00000614890 801 ntTSL 3 BASIC20.88■□□□□ 0.93
NBPF4Q96M43 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF4Q96M43 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC20.88■□□□□ 0.93
NBPF4Q96M43 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.88■□□□□ 0.93
NBPF4Q96M43 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF4Q96M43 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.88■□□□□ 0.93
NBPF4Q96M43 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF4Q96M43 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.88■□□□□ 0.93
NBPF4Q96M43 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF4Q96M43 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF4Q96M43 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF4Q96M43 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NBPF4Q96M43 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.87■□□□□ 0.93
NBPF4Q96M43 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NBPF4Q96M43 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
NBPF4Q96M43 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NBPF4Q96M43 AC138932.1-201ENST00000534164 6830 ntBASIC20.87■□□□□ 0.93
NBPF4Q96M43 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NBPF4Q96M43 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NBPF4Q96M43 AC016694.1-201ENST00000434179 700 ntBASIC20.87■□□□□ 0.93
NBPF4Q96M43 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC20.87■□□□□ 0.93
NBPF4Q96M43 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC20.87■□□□□ 0.93
NBPF4Q96M43 AC108725.1-201ENST00000495472 409 ntBASIC20.87■□□□□ 0.93
NBPF4Q96M43 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC20.87■□□□□ 0.93
NBPF4Q96M43 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC20.87■□□□□ 0.93
NBPF4Q96M43 CMC2-214ENST00000565925 640 ntTSL 5 BASIC20.87■□□□□ 0.93
NBPF4Q96M43 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC20.87■□□□□ 0.93
NBPF4Q96M43 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
NBPF4Q96M43 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC20.87■□□□□ 0.93
NBPF4Q96M43 HADH-212ENST00000638621 741 ntTSL 5 BASIC20.87■□□□□ 0.93
NBPF4Q96M43 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NBPF4Q96M43 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NBPF4Q96M43 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NBPF4Q96M43 CYP2AB1P-202ENST00000454440 1456 ntBASIC20.87■□□□□ 0.93
NBPF4Q96M43 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NBPF4Q96M43 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
NBPF4Q96M43 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NBPF4Q96M43 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NBPF4Q96M43 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.86■□□□□ 0.93
NBPF4Q96M43 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NBPF4Q96M43 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NBPF4Q96M43 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
NBPF4Q96M43 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC20.86■□□□□ 0.93
NBPF4Q96M43 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NBPF4Q96M43 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC20.86■□□□□ 0.93
NBPF4Q96M43 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC20.86■□□□□ 0.93
NBPF4Q96M43 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC20.86■□□□□ 0.93
NBPF4Q96M43 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NBPF4Q96M43 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC20.86■□□□□ 0.93
NBPF4Q96M43 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NBPF4Q96M43 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.86■□□□□ 0.93
NBPF4Q96M43 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NBPF4Q96M43 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NBPF4Q96M43 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
NBPF4Q96M43 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NBPF4Q96M43 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NBPF4Q96M43 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NBPF4Q96M43 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NBPF4Q96M43 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NBPF4Q96M43 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NBPF4Q96M43 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NBPF4Q96M43 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC20.85■□□□□ 0.93
NBPF4Q96M43 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NBPF4Q96M43 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
NBPF4Q96M43 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NBPF4Q96M43 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
NBPF4Q96M43 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
NBPF4Q96M43 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms