Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 AC091167.2-201ENST00000579581 588 ntBASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 AC138894.3-201ENST00000603787 634 ntBASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.23■□□□□ 0.19
CHMP6Q96FZ7 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 RCN1P2-201ENST00000398357 915 ntBASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 BNIP3P18-201ENST00000593976 575 ntBASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 CYP2A7P1-201ENST00000595391 815 ntBASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 FGD5P1-202ENST00000614866 2498 ntBASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CHMP6Q96FZ7 MROH4P-201ENST00000431302 1578 ntBASIC16.21■□□□□ 0.19
CHMP6Q96FZ7 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.21■□□□□ 0.19
CHMP6Q96FZ7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP6Q96FZ7 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP6Q96FZ7 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP6Q96FZ7 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP6Q96FZ7 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CHMP6Q96FZ7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP6Q96FZ7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP6Q96FZ7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CHMP6Q96FZ7 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.21■□□□□ 0.19
CHMP6Q96FZ7 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP6Q96FZ7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.21■□□□□ 0.19
CHMP6Q96FZ7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP6Q96FZ7 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP6Q96FZ7 UPK3BP1-201ENST00000428678 509 ntBASIC16.21■□□□□ 0.19
CHMP6Q96FZ7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.21■□□□□ 0.19
CHMP6Q96FZ7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.21■□□□□ 0.19
CHMP6Q96FZ7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.21■□□□□ 0.19
CHMP6Q96FZ7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.21■□□□□ 0.19
CHMP6Q96FZ7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.21■□□□□ 0.19
CHMP6Q96FZ7 AC012615.1-201ENST00000565797 1299 ntBASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms