Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 MIR3615-201ENST00000581999 87 ntBASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 PCDHB17P-201ENST00000539533 2393 ntBASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
U2AF1L4Q8WU68 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 FAM21FP-201ENST00000426241 1131 ntBASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 AC026979.3-201ENST00000607315 403 ntBASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 AL603756.1-201ENST00000606511 2163 ntBASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2AF1L4Q8WU68 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 AC018695.7-201ENST00000624587 2492 ntBASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 RARRES2P5-201ENST00000564013 466 ntBASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
U2AF1L4Q8WU68 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
U2AF1L4Q8WU68 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms