Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 POM121L3P-201ENST00000419331 1163 ntBASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 DRAXINP1-201ENST00000437611 948 ntBASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 AP005117.1-201ENST00000584346 1413 ntBASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.72□□□□□ -0.05
CNIH3Q8TBE1 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 FGD5P1-202ENST00000614866 2498 ntBASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 HCG4-201ENST00000418983 998 ntBASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 LINC00265-3P-201ENST00000447588 903 ntBASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 AC074051.2-201ENST00000565115 352 ntBASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 AP001269.4-201ENST00000609611 512 ntBASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 AL589182.2-201ENST00000619332 1049 ntBASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CNIH3Q8TBE1 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.71□□□□□ -0.06
CNIH3Q8TBE1 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
CNIH3Q8TBE1 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CNIH3Q8TBE1 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
CNIH3Q8TBE1 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CNIH3Q8TBE1 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CNIH3Q8TBE1 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
CNIH3Q8TBE1 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CNIH3Q8TBE1 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CNIH3Q8TBE1 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CNIH3Q8TBE1 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CNIH3Q8TBE1 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.7□□□□□ -0.06
CNIH3Q8TBE1 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CNIH3Q8TBE1 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CNIH3Q8TBE1 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.7□□□□□ -0.06
CNIH3Q8TBE1 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CNIH3Q8TBE1 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CNIH3Q8TBE1 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CNIH3Q8TBE1 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CNIH3Q8TBE1 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.7□□□□□ -0.06
CNIH3Q8TBE1 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CNIH3Q8TBE1 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CNIH3Q8TBE1 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CNIH3Q8TBE1 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms