Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 TCAF2P1-201ENST00000291129 2421 ntBASIC15.67■□□□□ 0.1
HIPK4Q8NE63 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.67■□□□□ 0.1
HIPK4Q8NE63 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 PAWRP1-201ENST00000451083 565 ntBASIC15.67■□□□□ 0.1
HIPK4Q8NE63 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.67■□□□□ 0.1
HIPK4Q8NE63 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 TMBIM7P-203ENST00000641617 1718 ntBASIC15.67■□□□□ 0.1
HIPK4Q8NE63 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HIPK4Q8NE63 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 AC091951.1-201ENST00000512854 2465 ntBASIC15.66■□□□□ 0.1
HIPK4Q8NE63 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.66■□□□□ 0.1
HIPK4Q8NE63 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIPK4Q8NE63 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HIPK4Q8NE63 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HIPK4Q8NE63 AC087481.3-201ENST00000602886 1894 ntBASIC15.65■□□□□ 0.1
HIPK4Q8NE63 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HIPK4Q8NE63 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HIPK4Q8NE63 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HIPK4Q8NE63 AC117489.1-201ENST00000625169 3217 ntBASIC15.65■□□□□ 0.1
HIPK4Q8NE63 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HIPK4Q8NE63 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HIPK4Q8NE63 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms