Protein–RNA interactions for Protein: Q8IV31

TMEM139, Transmembrane protein 139, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139Q8IV31 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEM139Q8IV31 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM139Q8IV31 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TMEM139Q8IV31 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TMEM139Q8IV31 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
TMEM139Q8IV31 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TMEM139Q8IV31 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.2■□□□□ 0.34
TMEM139Q8IV31 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 RHOQP3-201ENST00000437982 621 ntBASIC17.2■□□□□ 0.34
TMEM139Q8IV31 HCG4P8-203ENST00000443049 980 ntBASIC17.2■□□□□ 0.34
TMEM139Q8IV31 PRYP6-201ENST00000514804 343 ntBASIC17.2■□□□□ 0.34
TMEM139Q8IV31 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 MIR4751-201ENST00000578027 74 ntBASIC17.2■□□□□ 0.34
TMEM139Q8IV31 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 AC148477.8-201ENST00000624298 468 ntBASIC17.2■□□□□ 0.34
TMEM139Q8IV31 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 FOXO1B-201ENST00000504678 1527 ntBASIC17.2■□□□□ 0.34
TMEM139Q8IV31 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM139Q8IV31 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 AC007686.3-201ENST00000619017 3487 ntBASIC17.19■□□□□ 0.34
TMEM139Q8IV31 AC139749.1-202ENST00000617529 3139 ntBASIC17.19■□□□□ 0.34
TMEM139Q8IV31 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 AC108751.1-201ENST00000490852 363 ntBASIC17.19■□□□□ 0.34
TMEM139Q8IV31 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 AC010507.1-201ENST00000633895 436 ntBASIC17.19■□□□□ 0.34
TMEM139Q8IV31 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM139Q8IV31 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.18■□□□□ 0.34
TMEM139Q8IV31 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM139Q8IV31 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM139Q8IV31 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.18■□□□□ 0.34
TMEM139Q8IV31 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.18■□□□□ 0.34
TMEM139Q8IV31 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms