Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HERC4Q5GLZ8 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
HERC4Q5GLZ8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
HERC4Q5GLZ8 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 HLA-H-201ENST00000383620 1096 ntBASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 AC107890.1-201ENST00000422478 521 ntBASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 FAM58DP-201ENST00000428076 619 ntBASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 AP001059.3-201ENST00000619053 235 ntBASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 AC022188.1-201ENST00000620960 1664 ntBASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 PAUPAR-201ENST00000630360 2965 ntBASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 AC008677.1-201ENST00000519230 1561 ntBASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 AP3S2-216ENST00000617003 1561 ntBASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HERC4Q5GLZ8 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 KRT18P32-201ENST00000424695 1287 ntBASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.94■□□□□ 0.46
HERC4Q5GLZ8 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.93■□□□□ 0.46
HERC4Q5GLZ8 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HERC4Q5GLZ8 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HERC4Q5GLZ8 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HERC4Q5GLZ8 AP003680.1-201ENST00000598970 3660 ntBASIC17.93■□□□□ 0.46
HERC4Q5GLZ8 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HERC4Q5GLZ8 AC007950.2-201ENST00000615045 2347 ntBASIC17.93■□□□□ 0.46
HERC4Q5GLZ8 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
HERC4Q5GLZ8 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HERC4Q5GLZ8 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HERC4Q5GLZ8 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.93■□□□□ 0.46
HERC4Q5GLZ8 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HERC4Q5GLZ8 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.93■□□□□ 0.46
HERC4Q5GLZ8 NME2P1-201ENST00000426182 414 ntBASIC17.93■□□□□ 0.46
HERC4Q5GLZ8 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.93■□□□□ 0.46
HERC4Q5GLZ8 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.93■□□□□ 0.46
HERC4Q5GLZ8 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.93■□□□□ 0.46
HERC4Q5GLZ8 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
HERC4Q5GLZ8 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.93■□□□□ 0.46
HERC4Q5GLZ8 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HERC4Q5GLZ8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HERC4Q5GLZ8 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.93■□□□□ 0.46
HERC4Q5GLZ8 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HERC4Q5GLZ8 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HERC4Q5GLZ8 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HERC4Q5GLZ8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HERC4Q5GLZ8 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.93■□□□□ 0.46
HERC4Q5GLZ8 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms