Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 AC138035.3-201ENST00000622706 2791 ntBASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KHDC1Q4VXA5 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 AC004835.2-201ENST00000603762 682 ntBASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 AC008267.7-201ENST00000624570 1194 ntBASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 CICP13-201ENST00000422015 2789 ntBASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KHDC1Q4VXA5 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 PRYP6-201ENST00000514804 343 ntBASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 AP000842.3-202ENST00000569238 1080 ntBASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.28■□□□□ 0.2
KHDC1Q4VXA5 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms