Protein–RNA interactions for Protein: Q00403

GTF2B, Transcription initiation factor IIB, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2BQ00403 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GTF2BQ00403 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
GTF2BQ00403 BTBD7P1-201ENST00000447253 1453 ntBASIC17.43■□□□□ 0.38
GTF2BQ00403 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.43■□□□□ 0.38
GTF2BQ00403 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GTF2BQ00403 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.43■□□□□ 0.38
GTF2BQ00403 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2BQ00403 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2BQ00403 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.42■□□□□ 0.38
GTF2BQ00403 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.42■□□□□ 0.38
GTF2BQ00403 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.42■□□□□ 0.38
GTF2BQ00403 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2BQ00403 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2BQ00403 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
GTF2BQ00403 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2BQ00403 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.42■□□□□ 0.38
GTF2BQ00403 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.42■□□□□ 0.38
GTF2BQ00403 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2BQ00403 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.42■□□□□ 0.38
GTF2BQ00403 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.42■□□□□ 0.38
GTF2BQ00403 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2BQ00403 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.42■□□□□ 0.38
GTF2BQ00403 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.42■□□□□ 0.38
GTF2BQ00403 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.42■□□□□ 0.38
GTF2BQ00403 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.42■□□□□ 0.38
GTF2BQ00403 AC074044.1-201ENST00000609673 707 ntBASIC17.42■□□□□ 0.38
GTF2BQ00403 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.42■□□□□ 0.38
GTF2BQ00403 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2BQ00403 AL109936.8-201ENST00000641772 604 ntBASIC17.42■□□□□ 0.38
GTF2BQ00403 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2BQ00403 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2BQ00403 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2BQ00403 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
GTF2BQ00403 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2BQ00403 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2BQ00403 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
GTF2BQ00403 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2BQ00403 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2BQ00403 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.42■□□□□ 0.38
GTF2BQ00403 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2BQ00403 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.42■□□□□ 0.38
GTF2BQ00403 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2BQ00403 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2BQ00403 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.42■□□□□ 0.38
GTF2BQ00403 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2BQ00403 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
GTF2BQ00403 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.41■□□□□ 0.38
GTF2BQ00403 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
GTF2BQ00403 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2BQ00403 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2BQ00403 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2BQ00403 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
GTF2BQ00403 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2BQ00403 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
GTF2BQ00403 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.41■□□□□ 0.38
GTF2BQ00403 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2BQ00403 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.41■□□□□ 0.38
GTF2BQ00403 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.41■□□□□ 0.38
GTF2BQ00403 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2BQ00403 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2BQ00403 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
GTF2BQ00403 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.41■□□□□ 0.38
GTF2BQ00403 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.41■□□□□ 0.38
GTF2BQ00403 AC114501.2-201ENST00000439631 535 ntBASIC17.41■□□□□ 0.38
GTF2BQ00403 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.41■□□□□ 0.38
GTF2BQ00403 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.41■□□□□ 0.38
GTF2BQ00403 AL512638.1-201ENST00000457493 794 ntBASIC17.41■□□□□ 0.38
GTF2BQ00403 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.41■□□□□ 0.38
GTF2BQ00403 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2BQ00403 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.41■□□□□ 0.38
GTF2BQ00403 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
GTF2BQ00403 AC008738.7-201ENST00000609744 511 ntBASIC17.41■□□□□ 0.38
GTF2BQ00403 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.41■□□□□ 0.38
GTF2BQ00403 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.41■□□□□ 0.38
GTF2BQ00403 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2BQ00403 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
GTF2BQ00403 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
GTF2BQ00403 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.41■□□□□ 0.38
GTF2BQ00403 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2BQ00403 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.4■□□□□ 0.38
GTF2BQ00403 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2BQ00403 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2BQ00403 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
GTF2BQ00403 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
GTF2BQ00403 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
GTF2BQ00403 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
GTF2BQ00403 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2BQ00403 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2BQ00403 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.4■□□□□ 0.38
GTF2BQ00403 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2BQ00403 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
GTF2BQ00403 RPL13P2-201ENST00000440687 659 ntBASIC17.4■□□□□ 0.38
GTF2BQ00403 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.4■□□□□ 0.38
GTF2BQ00403 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.4■□□□□ 0.38
GTF2BQ00403 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.4■□□□□ 0.38
GTF2BQ00403 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.4■□□□□ 0.38
GTF2BQ00403 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.4■□□□□ 0.38
GTF2BQ00403 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.4■□□□□ 0.38
GTF2BQ00403 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
GTF2BQ00403 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms