Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.94□□□□□ -0.18
UBA52P62987 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBA52P62987 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.94□□□□□ -0.18
UBA52P62987 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBA52P62987 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBA52P62987 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBA52P62987 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.94□□□□□ -0.18
UBA52P62987 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.94□□□□□ -0.18
UBA52P62987 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
UBA52P62987 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBA52P62987 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBA52P62987 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBA52P62987 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBA52P62987 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBA52P62987 IGLL3P-201ENST00000412472 434 ntBASIC13.94□□□□□ -0.18
UBA52P62987 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.94□□□□□ -0.18
UBA52P62987 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBA52P62987 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.94□□□□□ -0.18
UBA52P62987 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
UBA52P62987 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.94□□□□□ -0.18
UBA52P62987 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
UBA52P62987 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC13.94□□□□□ -0.18
UBA52P62987 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.94□□□□□ -0.18
UBA52P62987 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.94□□□□□ -0.18
UBA52P62987 PDPK2P-202ENST00000562415 1191 ntBASIC13.94□□□□□ -0.18
UBA52P62987 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.94□□□□□ -0.18
UBA52P62987 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBA52P62987 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBA52P62987 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.94□□□□□ -0.18
UBA52P62987 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBA52P62987 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBA52P62987 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBA52P62987 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBA52P62987 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.94□□□□□ -0.18
UBA52P62987 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBA52P62987 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
UBA52P62987 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBA52P62987 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBA52P62987 AC005089.1-201ENST00000619486 2241 ntBASIC13.94□□□□□ -0.18
UBA52P62987 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBA52P62987 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBA52P62987 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBA52P62987 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBA52P62987 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBA52P62987 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBA52P62987 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
UBA52P62987 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBA52P62987 BCAR1-209ENST00000546196 1340 ntBASIC13.93□□□□□ -0.18
UBA52P62987 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
UBA52P62987 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBA52P62987 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBA52P62987 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.93□□□□□ -0.18
UBA52P62987 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UBA52P62987 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBA52P62987 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
UBA52P62987 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.93□□□□□ -0.18
UBA52P62987 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBA52P62987 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.93□□□□□ -0.18
UBA52P62987 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBA52P62987 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBA52P62987 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.93□□□□□ -0.18
UBA52P62987 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.93□□□□□ -0.18
UBA52P62987 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.93□□□□□ -0.18
UBA52P62987 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.93□□□□□ -0.18
UBA52P62987 AC109462.3-201ENST00000573934 613 ntBASIC13.93□□□□□ -0.18
UBA52P62987 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.93□□□□□ -0.18
UBA52P62987 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.93□□□□□ -0.18
UBA52P62987 AC106028.4-201ENST00000614509 607 ntBASIC13.93□□□□□ -0.18
UBA52P62987 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
UBA52P62987 AC004877.2-201ENST00000623941 599 ntBASIC13.93□□□□□ -0.18
UBA52P62987 AC010507.1-201ENST00000633895 436 ntBASIC13.93□□□□□ -0.18
UBA52P62987 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBA52P62987 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBA52P62987 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBA52P62987 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBA52P62987 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBA52P62987 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.93□□□□□ -0.18
UBA52P62987 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UBA52P62987 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UBA52P62987 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBA52P62987 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.93□□□□□ -0.18
UBA52P62987 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UBA52P62987 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.93□□□□□ -0.18
UBA52P62987 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UBA52P62987 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UBA52P62987 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBA52P62987 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.93□□□□□ -0.18
UBA52P62987 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBA52P62987 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
UBA52P62987 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBA52P62987 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
UBA52P62987 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UBA52P62987 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
UBA52P62987 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBA52P62987 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBA52P62987 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UBA52P62987 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.93□□□□□ -0.18
UBA52P62987 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBA52P62987 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.92□□□□□ -0.18
UBA52P62987 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms