Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
CXCR4P61073 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CXCR4P61073 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCR4P61073 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CXCR4P61073 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.66□□□□□ -0.06
CXCR4P61073 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCR4P61073 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CXCR4P61073 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCR4P61073 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCR4P61073 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCR4P61073 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.66□□□□□ -0.06
CXCR4P61073 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CXCR4P61073 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.66□□□□□ -0.06
CXCR4P61073 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.66□□□□□ -0.06
CXCR4P61073 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.66□□□□□ -0.06
CXCR4P61073 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CXCR4P61073 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCR4P61073 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CXCR4P61073 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.66□□□□□ -0.06
CXCR4P61073 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.66□□□□□ -0.06
CXCR4P61073 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCR4P61073 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCR4P61073 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CXCR4P61073 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.66□□□□□ -0.06
CXCR4P61073 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CXCR4P61073 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.66□□□□□ -0.06
CXCR4P61073 ELK2BP-201ENST00000415014 1224 ntBASIC14.66□□□□□ -0.06
CXCR4P61073 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.66□□□□□ -0.06
CXCR4P61073 SCARNA2-201ENST00000458748 420 ntBASIC14.66□□□□□ -0.06
CXCR4P61073 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CXCR4P61073 AC107918.2-201ENST00000530817 355 ntBASIC14.66□□□□□ -0.06
CXCR4P61073 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CXCR4P61073 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.66□□□□□ -0.06
CXCR4P61073 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.66□□□□□ -0.06
CXCR4P61073 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.66□□□□□ -0.06
CXCR4P61073 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.66□□□□□ -0.06
CXCR4P61073 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCR4P61073 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.66□□□□□ -0.06
CXCR4P61073 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.66□□□□□ -0.06
CXCR4P61073 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CXCR4P61073 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCR4P61073 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCR4P61073 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCR4P61073 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCR4P61073 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCR4P61073 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
CXCR4P61073 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.66□□□□□ -0.06
CXCR4P61073 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CXCR4P61073 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCR4P61073 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.66□□□□□ -0.06
CXCR4P61073 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.66□□□□□ -0.06
CXCR4P61073 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCR4P61073 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCR4P61073 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCR4P61073 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCR4P61073 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CXCR4P61073 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CXCR4P61073 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CXCR4P61073 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CXCR4P61073 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.65□□□□□ -0.06
CXCR4P61073 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCR4P61073 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCR4P61073 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCR4P61073 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCR4P61073 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCR4P61073 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCR4P61073 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
CXCR4P61073 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCR4P61073 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCR4P61073 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCR4P61073 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.65□□□□□ -0.06
CXCR4P61073 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.65□□□□□ -0.06
CXCR4P61073 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.65□□□□□ -0.06
CXCR4P61073 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCR4P61073 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.65□□□□□ -0.06
CXCR4P61073 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.65□□□□□ -0.06
CXCR4P61073 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.65□□□□□ -0.06
CXCR4P61073 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCR4P61073 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCR4P61073 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CXCR4P61073 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.65□□□□□ -0.06
CXCR4P61073 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCR4P61073 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCR4P61073 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCR4P61073 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CXCR4P61073 WASH6P-202ENST00000359512 1437 ntBASIC14.65□□□□□ -0.06
CXCR4P61073 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.65□□□□□ -0.06
CXCR4P61073 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
CXCR4P61073 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CXCR4P61073 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CXCR4P61073 AJ011931.1-201ENST00000618749 2492 ntBASIC14.65□□□□□ -0.06
CXCR4P61073 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.65□□□□□ -0.06
CXCR4P61073 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CXCR4P61073 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.64□□□□□ -0.07
CXCR4P61073 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CXCR4P61073 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CXCR4P61073 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CXCR4P61073 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.64□□□□□ -0.07
CXCR4P61073 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.64□□□□□ -0.07
CXCR4P61073 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms