Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA3P59666 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA3P59666 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA3P59666 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.11□□□□□ -0.15
DEFA3P59666 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 CICP8-201ENST00000455800 2813 ntBASIC14.11□□□□□ -0.15
DEFA3P59666 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
DEFA3P59666 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.11□□□□□ -0.15
DEFA3P59666 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
DEFA3P59666 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
DEFA3P59666 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.11□□□□□ -0.15
DEFA3P59666 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.11□□□□□ -0.15
DEFA3P59666 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.11□□□□□ -0.15
DEFA3P59666 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
DEFA3P59666 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.11□□□□□ -0.15
DEFA3P59666 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.11□□□□□ -0.15
DEFA3P59666 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
DEFA3P59666 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.11□□□□□ -0.15
DEFA3P59666 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.11□□□□□ -0.15
DEFA3P59666 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.11□□□□□ -0.15
DEFA3P59666 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.11□□□□□ -0.15
DEFA3P59666 AP005242.2-201ENST00000580065 1175 ntBASIC14.11□□□□□ -0.15
DEFA3P59666 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.11□□□□□ -0.15
DEFA3P59666 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
DEFA3P59666 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.11□□□□□ -0.15
DEFA3P59666 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 AL353593.2-201ENST00000602529 1483 ntBASIC14.11□□□□□ -0.15
DEFA3P59666 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
DEFA3P59666 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 INTS4P1-203ENST00000641008 3683 ntBASIC14.11□□□□□ -0.15
DEFA3P59666 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.11□□□□□ -0.15
DEFA3P59666 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 AC132938.5-201ENST00000624980 1813 ntBASIC14.11□□□□□ -0.15
DEFA3P59666 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA3P59666 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
DEFA3P59666 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
DEFA3P59666 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.1□□□□□ -0.15
DEFA3P59666 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
DEFA3P59666 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DEFA3P59666 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
DEFA3P59666 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
DEFA3P59666 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DEFA3P59666 TCAF1P1-201ENST00000414990 2232 ntBASIC14.1□□□□□ -0.15
DEFA3P59666 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
DEFA3P59666 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
DEFA3P59666 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.1□□□□□ -0.15
DEFA3P59666 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
DEFA3P59666 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
DEFA3P59666 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DEFA3P59666 HSPA7-201ENST00000445535 1927 ntBASIC14.1□□□□□ -0.15
DEFA3P59666 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DEFA3P59666 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
DEFA3P59666 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
DEFA3P59666 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DEFA3P59666 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.1□□□□□ -0.15
DEFA3P59666 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.1□□□□□ -0.15
DEFA3P59666 LINC01238-205ENST00000567549 1107 ntBASIC14.1□□□□□ -0.15
DEFA3P59666 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.1□□□□□ -0.15
DEFA3P59666 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.1□□□□□ -0.15
DEFA3P59666 AC092666.2-201ENST00000613287 246 ntBASIC14.1□□□□□ -0.15
DEFA3P59666 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DEFA3P59666 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
DEFA3P59666 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
DEFA3P59666 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.1□□□□□ -0.15
DEFA3P59666 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.1□□□□□ -0.15
DEFA3P59666 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.1□□□□□ -0.15
DEFA3P59666 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
DEFA3P59666 AC092127.1-201ENST00000567093 3455 ntBASIC14.1□□□□□ -0.15
DEFA3P59666 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
DEFA3P59666 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
DEFA3P59666 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
DEFA3P59666 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
DEFA3P59666 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
DEFA3P59666 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms