Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6V1AP38606 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC20.24■□□□□ 0.83
ATP6V1AP38606 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6V1AP38606 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6V1AP38606 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6V1AP38606 AP001282.1-201ENST00000531301 1499 ntBASIC20.24■□□□□ 0.83
ATP6V1AP38606 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.24■□□□□ 0.83
ATP6V1AP38606 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC20.24■□□□□ 0.83
ATP6V1AP38606 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V1AP38606 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ATP6V1AP38606 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP6V1AP38606 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC20.23■□□□□ 0.83
ATP6V1AP38606 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V1AP38606 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V1AP38606 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V1AP38606 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V1AP38606 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V1AP38606 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V1AP38606 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V1AP38606 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V1AP38606 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V1AP38606 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V1AP38606 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP6V1AP38606 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP6V1AP38606 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC20.23■□□□□ 0.83
ATP6V1AP38606 HLA-DPB2-205ENST00000435074 1188 ntBASIC20.23■□□□□ 0.83
ATP6V1AP38606 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC20.23■□□□□ 0.83
ATP6V1AP38606 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V1AP38606 AC026410.3-201ENST00000514280 936 ntBASIC20.23■□□□□ 0.83
ATP6V1AP38606 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V1AP38606 AC023310.1-201ENST00000554836 735 ntBASIC20.23■□□□□ 0.83
ATP6V1AP38606 IFT20-206ENST00000578122 834 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP6V1AP38606 IFT20-208ENST00000578985 831 ntTSL 3 BASIC20.23■□□□□ 0.83
ATP6V1AP38606 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC20.23■□□□□ 0.83
ATP6V1AP38606 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V1AP38606 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP6V1AP38606 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP6V1AP38606 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V1AP38606 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V1AP38606 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V1AP38606 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP6V1AP38606 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V1AP38606 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V1AP38606 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V1AP38606 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC20.22■□□□□ 0.83
ATP6V1AP38606 AL607033.1-201ENST00000623900 1599 ntBASIC20.22■□□□□ 0.83
ATP6V1AP38606 DRD5P1-201ENST00000456605 1438 ntBASIC20.22■□□□□ 0.83
ATP6V1AP38606 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V1AP38606 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V1AP38606 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V1AP38606 TEX30-203ENST00000376022 828 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP6V1AP38606 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ATP6V1AP38606 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP6V1AP38606 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V1AP38606 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC20.22■□□□□ 0.83
ATP6V1AP38606 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC20.22■□□□□ 0.83
ATP6V1AP38606 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC20.22■□□□□ 0.83
ATP6V1AP38606 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ATP6V1AP38606 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC20.22■□□□□ 0.83
ATP6V1AP38606 AC005052.1-201ENST00000625181 2492 ntBASIC20.22■□□□□ 0.83
ATP6V1AP38606 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V1AP38606 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP6V1AP38606 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ATP6V1AP38606 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ATP6V1AP38606 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V1AP38606 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V1AP38606 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V1AP38606 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC20.21■□□□□ 0.83
ATP6V1AP38606 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V1AP38606 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V1AP38606 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
ATP6V1AP38606 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V1AP38606 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V1AP38606 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V1AP38606 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP6V1AP38606 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V1AP38606 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V1AP38606 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V1AP38606 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC20.21■□□□□ 0.83
ATP6V1AP38606 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V1AP38606 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V1AP38606 KRT18P43-201ENST00000469825 1281 ntBASIC20.21■□□□□ 0.83
ATP6V1AP38606 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC20.21■□□□□ 0.83
ATP6V1AP38606 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC20.21■□□□□ 0.83
ATP6V1AP38606 AHRR-211ENST00000515206 462 ntTSL 5 BASIC20.21■□□□□ 0.83
ATP6V1AP38606 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC20.21■□□□□ 0.83
ATP6V1AP38606 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V1AP38606 AC025279.2-201ENST00000569730 653 ntBASIC20.21■□□□□ 0.83
ATP6V1AP38606 AC097359.3-201ENST00000603982 1210 ntBASIC20.21■□□□□ 0.83
ATP6V1AP38606 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V1AP38606 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC20.21■□□□□ 0.83
ATP6V1AP38606 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V1AP38606 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V1AP38606 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V1AP38606 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V1AP38606 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V1AP38606 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
ATP6V1AP38606 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
ATP6V1AP38606 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V1AP38606 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms