Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
RAB4AP20338 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.38□□□□□ -0.43
RAB4AP20338 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
RAB4AP20338 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.37□□□□□ -0.43
RAB4AP20338 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
RAB4AP20338 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.37□□□□□ -0.43
RAB4AP20338 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
RAB4AP20338 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
RAB4AP20338 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
RAB4AP20338 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RAB4AP20338 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RAB4AP20338 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.37□□□□□ -0.43
RAB4AP20338 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
RAB4AP20338 PEX7-202ENST00000367756 680 ntTSL 3 BASIC12.37□□□□□ -0.43
RAB4AP20338 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 UBE2SP1-201ENST00000450587 669 ntBASIC12.37□□□□□ -0.43
RAB4AP20338 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC12.37□□□□□ -0.43
RAB4AP20338 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
RAB4AP20338 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC12.37□□□□□ -0.43
RAB4AP20338 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC12.37□□□□□ -0.43
RAB4AP20338 AC111152.3-201ENST00000569699 673 ntBASIC12.37□□□□□ -0.43
RAB4AP20338 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC12.37□□□□□ -0.43
RAB4AP20338 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.37□□□□□ -0.43
RAB4AP20338 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
RAB4AP20338 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
RAB4AP20338 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC12.37□□□□□ -0.43
RAB4AP20338 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RAB4AP20338 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB4AP20338 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB4AP20338 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB4AP20338 AC010491.1-201ENST00000563101 2797 ntBASIC12.36□□□□□ -0.43
RAB4AP20338 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB4AP20338 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB4AP20338 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB4AP20338 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB4AP20338 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB4AP20338 AL135999.2-201ENST00000622438 1686 ntBASIC12.36□□□□□ -0.43
RAB4AP20338 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB4AP20338 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RAB4AP20338 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB4AP20338 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
RAB4AP20338 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB4AP20338 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
RAB4AP20338 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RAB4AP20338 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB4AP20338 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC12.36□□□□□ -0.43
RAB4AP20338 ID1-201ENST00000376105 1233 ntBASIC12.36□□□□□ -0.43
RAB4AP20338 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB4AP20338 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC12.36□□□□□ -0.43
RAB4AP20338 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC12.36□□□□□ -0.43
RAB4AP20338 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB4AP20338 ECEL1P2-202ENST00000465689 757 ntBASIC12.36□□□□□ -0.43
RAB4AP20338 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RAB4AP20338 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB4AP20338 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RAB4AP20338 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB4AP20338 MIR4651-201ENST00000582622 73 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms