Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PRKCAP17252 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.94□□□□□ -0.02
PRKCAP17252 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PRKCAP17252 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PRKCAP17252 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
PRKCAP17252 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PRKCAP17252 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PRKCAP17252 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PRKCAP17252 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.94□□□□□ -0.02
PRKCAP17252 ELL2P1-201ENST00000413990 1906 ntBASIC14.94□□□□□ -0.02
PRKCAP17252 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PRKCAP17252 AL137784.3-201ENST00000623858 2288 ntBASIC14.94□□□□□ -0.02
PRKCAP17252 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PRKCAP17252 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 AC073439.1-201ENST00000624121 1774 ntBASIC14.93□□□□□ -0.02
PRKCAP17252 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
PRKCAP17252 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 AC005622.1-201ENST00000636801 1703 ntBASIC14.93□□□□□ -0.02
PRKCAP17252 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 RPSAP43-201ENST00000402237 625 ntBASIC14.93□□□□□ -0.02
PRKCAP17252 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.93□□□□□ -0.02
PRKCAP17252 UPF3AP3-201ENST00000420996 769 ntBASIC14.93□□□□□ -0.02
PRKCAP17252 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.93□□□□□ -0.02
PRKCAP17252 RN7SL589P-201ENST00000481268 310 ntBASIC14.93□□□□□ -0.02
PRKCAP17252 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.93□□□□□ -0.02
PRKCAP17252 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.93□□□□□ -0.02
PRKCAP17252 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.93□□□□□ -0.02
PRKCAP17252 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.93□□□□□ -0.02
PRKCAP17252 MIR3687-2-201ENST00000577708 61 ntBASIC14.93□□□□□ -0.02
PRKCAP17252 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.93□□□□□ -0.02
PRKCAP17252 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PRKCAP17252 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.93□□□□□ -0.02
PRKCAP17252 AC026120.1-201ENST00000611536 926 ntBASIC14.93□□□□□ -0.02
PRKCAP17252 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
PRKCAP17252 MIR3687-1-201ENST00000614492 61 ntBASIC14.93□□□□□ -0.02
PRKCAP17252 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.93□□□□□ -0.02
PRKCAP17252 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.93□□□□□ -0.02
PRKCAP17252 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.93□□□□□ -0.02
PRKCAP17252 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
PRKCAP17252 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.93□□□□□ -0.02
PRKCAP17252 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.93□□□□□ -0.02
PRKCAP17252 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.93□□□□□ -0.02
PRKCAP17252 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
PRKCAP17252 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PRKCAP17252 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.93□□□□□ -0.02
PRKCAP17252 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.93□□□□□ -0.02
PRKCAP17252 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.93□□□□□ -0.02
PRKCAP17252 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRKCAP17252 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.93□□□□□ -0.02
PRKCAP17252 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.92□□□□□ -0.02
PRKCAP17252 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.92□□□□□ -0.02
PRKCAP17252 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.92□□□□□ -0.02
PRKCAP17252 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCAP17252 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms