Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.98■□□□□ 0.31
CCDC130P13994 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC130P13994 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC130P13994 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC130P13994 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC130P13994 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC130P13994 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC130P13994 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC130P13994 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC130P13994 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC130P13994 AC018892.3-201ENST00000623986 2499 ntBASIC16.97■□□□□ 0.31
CCDC130P13994 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CCDC130P13994 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
CCDC130P13994 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC130P13994 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC130P13994 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC130P13994 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC130P13994 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC130P13994 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC130P13994 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC130P13994 PCDHA1-201ENST00000378133 2726 ntBASIC16.97■□□□□ 0.31
CCDC130P13994 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC130P13994 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC130P13994 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC130P13994 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC130P13994 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC130P13994 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.97■□□□□ 0.31
CCDC130P13994 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC130P13994 AC009477.1-201ENST00000452936 217 ntBASIC16.97■□□□□ 0.31
CCDC130P13994 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC130P13994 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC130P13994 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.97■□□□□ 0.31
CCDC130P13994 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC130P13994 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.97■□□□□ 0.31
CCDC130P13994 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC130P13994 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC130P13994 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC130P13994 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC130P13994 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC130P13994 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC130P13994 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC130P13994 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC130P13994 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC130P13994 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC130P13994 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CCDC130P13994 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC130P13994 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC130P13994 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC130P13994 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC130P13994 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCDC130P13994 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCDC130P13994 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCDC130P13994 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCDC130P13994 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC130P13994 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC130P13994 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCDC130P13994 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC130P13994 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC130P13994 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC130P13994 AL513523.2-202ENST00000427283 2040 ntBASIC16.96■□□□□ 0.31
CCDC130P13994 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC130P13994 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC130P13994 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC130P13994 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC130P13994 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC130P13994 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC130P13994 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CCDC130P13994 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC130P13994 EEF1DP4-201ENST00000446006 880 ntBASIC16.96■□□□□ 0.31
CCDC130P13994 SERBP1P3-201ENST00000459980 809 ntBASIC16.96■□□□□ 0.31
CCDC130P13994 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC130P13994 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC130P13994 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC130P13994 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC130P13994 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC130P13994 AC009407.1-201ENST00000568958 598 ntBASIC16.96■□□□□ 0.31
CCDC130P13994 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC130P13994 AJ011932.1-201ENST00000621707 465 ntBASIC16.96■□□□□ 0.31
CCDC130P13994 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCDC130P13994 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CCDC130P13994 AC022144.1-201ENST00000602255 1580 ntBASIC16.96■□□□□ 0.31
CCDC130P13994 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.96■□□□□ 0.31
CCDC130P13994 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC130P13994 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC130P13994 REXO1L1P-202ENST00000608646 1974 ntBASIC16.96■□□□□ 0.31
CCDC130P13994 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC130P13994 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC130P13994 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
CCDC130P13994 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
CCDC130P13994 AP003680.1-201ENST00000598970 3660 ntBASIC16.96■□□□□ 0.31
CCDC130P13994 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CCDC130P13994 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC130P13994 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CCDC130P13994 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC130P13994 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
CCDC130P13994 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.95■□□□□ 0.3
CCDC130P13994 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC130P13994 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
CCDC130P13994 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC130P13994 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms