Protein–RNA interactions for Protein: O96011

PEX11B, Peroxisomal membrane protein 11B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11BO96011 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.11■□□□□ 0.17
PEX11BO96011 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PEX11BO96011 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEX11BO96011 AC105250.1-201ENST00000509378 2057 ntBASIC16.11■□□□□ 0.17
PEX11BO96011 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.11■□□□□ 0.17
PEX11BO96011 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PEX11BO96011 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEX11BO96011 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PEX11BO96011 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PEX11BO96011 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEX11BO96011 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEX11BO96011 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PEX11BO96011 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEX11BO96011 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.11■□□□□ 0.17
PEX11BO96011 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.11■□□□□ 0.17
PEX11BO96011 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.11■□□□□ 0.17
PEX11BO96011 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.11■□□□□ 0.17
PEX11BO96011 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.11■□□□□ 0.17
PEX11BO96011 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.11■□□□□ 0.17
PEX11BO96011 KRT18P64-201ENST00000434946 1219 ntBASIC16.11■□□□□ 0.17
PEX11BO96011 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PEX11BO96011 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.11■□□□□ 0.17
PEX11BO96011 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.11■□□□□ 0.17
PEX11BO96011 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PEX11BO96011 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.11■□□□□ 0.17
PEX11BO96011 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
PEX11BO96011 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.11■□□□□ 0.17
PEX11BO96011 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEX11BO96011 AC008738.7-201ENST00000609744 511 ntBASIC16.11■□□□□ 0.17
PEX11BO96011 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.11■□□□□ 0.17
PEX11BO96011 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PEX11BO96011 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEX11BO96011 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEX11BO96011 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PEX11BO96011 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEX11BO96011 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.11■□□□□ 0.17
PEX11BO96011 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEX11BO96011 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEX11BO96011 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PEX11BO96011 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.11■□□□□ 0.17
PEX11BO96011 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEX11BO96011 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEX11BO96011 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.11■□□□□ 0.17
PEX11BO96011 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.1■□□□□ 0.17
PEX11BO96011 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PEX11BO96011 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.1■□□□□ 0.17
PEX11BO96011 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.1■□□□□ 0.17
PEX11BO96011 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.1■□□□□ 0.17
PEX11BO96011 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PEX11BO96011 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PEX11BO96011 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
PEX11BO96011 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PEX11BO96011 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.1■□□□□ 0.17
PEX11BO96011 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PEX11BO96011 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PEX11BO96011 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.1■□□□□ 0.17
PEX11BO96011 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.1■□□□□ 0.17
PEX11BO96011 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PEX11BO96011 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.1■□□□□ 0.17
PEX11BO96011 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.1■□□□□ 0.17
PEX11BO96011 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PEX11BO96011 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PEX11BO96011 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.1■□□□□ 0.17
PEX11BO96011 AC114501.2-201ENST00000439631 535 ntBASIC16.1■□□□□ 0.17
PEX11BO96011 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.1■□□□□ 0.17
PEX11BO96011 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.1■□□□□ 0.17
PEX11BO96011 SDHAP3-202ENST00000515467 728 ntBASIC16.1■□□□□ 0.17
PEX11BO96011 LINC01115-203ENST00000606068 577 ntBASIC16.1■□□□□ 0.17
PEX11BO96011 AC074044.1-201ENST00000609673 707 ntBASIC16.1■□□□□ 0.17
PEX11BO96011 AC004840.1-201ENST00000636359 365 ntBASIC16.1■□□□□ 0.17
PEX11BO96011 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PEX11BO96011 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PEX11BO96011 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PEX11BO96011 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PEX11BO96011 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
PEX11BO96011 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PEX11BO96011 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PEX11BO96011 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PEX11BO96011 CICP6-201ENST00000457191 2729 ntBASIC16.1■□□□□ 0.17
PEX11BO96011 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PEX11BO96011 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PEX11BO96011 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.09■□□□□ 0.17
PEX11BO96011 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PEX11BO96011 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.09■□□□□ 0.17
PEX11BO96011 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.09■□□□□ 0.17
PEX11BO96011 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.09■□□□□ 0.17
PEX11BO96011 AC022144.1-201ENST00000602255 1580 ntBASIC16.09■□□□□ 0.17
PEX11BO96011 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PEX11BO96011 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.09■□□□□ 0.17
PEX11BO96011 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PEX11BO96011 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PEX11BO96011 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PEX11BO96011 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.09■□□□□ 0.17
PEX11BO96011 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PEX11BO96011 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PEX11BO96011 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PEX11BO96011 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PEX11BO96011 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PEX11BO96011 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.09■□□□□ 0.17
PEX11BO96011 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms