Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
ABCA1O95477 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
ABCA1O95477 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ABCA1O95477 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ABCA1O95477 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.49□□□□□ -0.25
ABCA1O95477 ANKRD19P-201ENST00000338192 862 ntBASIC13.49□□□□□ -0.25
ABCA1O95477 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.49□□□□□ -0.25
ABCA1O95477 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.49□□□□□ -0.25
ABCA1O95477 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.49□□□□□ -0.25
ABCA1O95477 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ABCA1O95477 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.49□□□□□ -0.25
ABCA1O95477 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.49□□□□□ -0.25
ABCA1O95477 AC011495.1-201ENST00000498085 584 ntBASIC13.49□□□□□ -0.25
ABCA1O95477 USP32P1-208ENST00000506594 1164 ntBASIC13.49□□□□□ -0.25
ABCA1O95477 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ABCA1O95477 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.49□□□□□ -0.25
ABCA1O95477 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ABCA1O95477 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.49□□□□□ -0.25
ABCA1O95477 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.49□□□□□ -0.25
ABCA1O95477 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
ABCA1O95477 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC13.49□□□□□ -0.25
ABCA1O95477 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
ABCA1O95477 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ABCA1O95477 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ABCA1O95477 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ABCA1O95477 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
ABCA1O95477 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.49□□□□□ -0.25
ABCA1O95477 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
ABCA1O95477 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.49□□□□□ -0.25
ABCA1O95477 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ABCA1O95477 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
ABCA1O95477 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ABCA1O95477 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.49□□□□□ -0.25
ABCA1O95477 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
ABCA1O95477 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
ABCA1O95477 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
ABCA1O95477 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
ABCA1O95477 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ABCA1O95477 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ABCA1O95477 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
ABCA1O95477 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.49□□□□□ -0.25
ABCA1O95477 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.49□□□□□ -0.25
ABCA1O95477 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ABCA1O95477 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ABCA1O95477 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ABCA1O95477 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ABCA1O95477 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.48□□□□□ -0.25
ABCA1O95477 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ABCA1O95477 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ABCA1O95477 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.48□□□□□ -0.25
ABCA1O95477 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ABCA1O95477 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ABCA1O95477 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.48□□□□□ -0.25
ABCA1O95477 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.48□□□□□ -0.25
ABCA1O95477 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.48□□□□□ -0.25
ABCA1O95477 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.48□□□□□ -0.25
ABCA1O95477 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.48□□□□□ -0.25
ABCA1O95477 AC015936.2-201ENST00000593177 259 ntBASIC13.48□□□□□ -0.25
ABCA1O95477 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.48□□□□□ -0.25
ABCA1O95477 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.48□□□□□ -0.25
ABCA1O95477 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ABCA1O95477 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.48□□□□□ -0.25
ABCA1O95477 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ABCA1O95477 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ABCA1O95477 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ABCA1O95477 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ABCA1O95477 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.48□□□□□ -0.25
ABCA1O95477 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
ABCA1O95477 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ABCA1O95477 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ABCA1O95477 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.48□□□□□ -0.25
ABCA1O95477 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.48□□□□□ -0.25
ABCA1O95477 AC092364.2-201ENST00000596710 2692 ntBASIC13.48□□□□□ -0.25
ABCA1O95477 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
ABCA1O95477 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ABCA1O95477 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ABCA1O95477 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.48□□□□□ -0.25
ABCA1O95477 TOP3BP1-201ENST00000420768 1380 ntBASIC13.48□□□□□ -0.25
ABCA1O95477 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
ABCA1O95477 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ABCA1O95477 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ABCA1O95477 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.48□□□□□ -0.25
ABCA1O95477 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ABCA1O95477 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ABCA1O95477 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.48□□□□□ -0.25
ABCA1O95477 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ABCA1O95477 MYCLP2-201ENST00000449268 967 ntBASIC13.48□□□□□ -0.25
ABCA1O95477 AC092337.1-201ENST00000568699 1129 ntBASIC13.48□□□□□ -0.25
ABCA1O95477 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.48□□□□□ -0.25
ABCA1O95477 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.48□□□□□ -0.25
ABCA1O95477 GPR182-203ENST00000622922 591 ntBASIC13.48□□□□□ -0.25
ABCA1O95477 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ABCA1O95477 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ABCA1O95477 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
ABCA1O95477 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ABCA1O95477 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ABCA1O95477 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.48□□□□□ -0.25
ABCA1O95477 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ABCA1O95477 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ABCA1O95477 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms